Magallana angulata (Portugese oyster): 128182344
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Entry
128182344 CDS
T09348
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128182344
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
90S particles
Other 90S particles
128182344
Pre-60S particles
Other pre-60S particles
128182344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
CLASP_N
HEAT_MROH2B_C
TPR_CAND1
FemAB
Motif
Other DBs
NCBI-GeneID:
128182344
NCBI-ProteinID:
XP_052706901
LinkDB
All DBs
Position
4:9075688..9094792
Genome browser
AA seq
1290 aa
AA seq
DB search
MGSRKIQQKLVSKQKKGKGKRWKKGQSSSSNPDIKTYREAAKNRFFQTSKGESSLTIDAL
AKHDEQQIDKDGDVSFKAESDVVSAAGKTFNTWATNWTECTNTTFGRVHRYWASNSAFHK
EVLAVLAAVTEVIKTQGGSESETEYFAALMTALETTDSEESLAAVTYLLSLVLKRVPAPV
LKSRFSEIAKQFLDVLVKHSEGQSTALLKSLLLCLALLLRVQEQATWSNSSTQRVYQGLL
AFTVHKKPKVRKAAHQGVNIILRGSSFMTQGETAPPYHPAGSMTAKFCIQVIEQCGGSGE
SSDTLHILTLLKDIMGTFSLNSVKAVCETILRVMTLSNVMVTSCGMKALFGLFSGTPKPT
TLNAELNAQIITALYDYQPSDNDVQPMKAWLAVMEAAHKNLARLDEKLCLSHLPRVFSIC
MTCLLSERMEVACSATKTMKELLKACLAPAMDGISVLVTSAPSGANTPLHKIIKALDTGL
GYQFHAAWGLVLQVFAVLFEVAGKECPLLFKKSVLSIANLRDSPRFPYKAELDHAIGAAV
KYLGPRHVLEAVPLNITGDDDDYTFPRSWLIPVIRDNVGNTELGFFTTYFLPLAAKLKKR
SLEAESTGNQVVCKSYDALQRQIWSLLPGFCNQPTDLTQSFKGICKILGSAISEREDLRV
EVMSGLRKLINKSKEDEECKKEVARFAKNFLPILFNLFTTEPENTKYTTRLAVLETTKCY
LNIADTALVNTYCDKCKEKFHEEGISSFKRQALLDLLLVMLPLVEEMRVKEIFQLVTQFL
SDTDKTLQKKCYRVLEDLCGSPSPACQGFLTQNLPGIQGVLLQSLSSSSPSSKAPRLRCL
INIFKLLPEEQKDFLLAVVPEAILCTKEIGEKARSASYLLLVEMGRAKIRWNKDEHGALE
DYFQMVMAGLGGSPQMVSSTLLALTRILYEFKASISSSLLETIVENLCILLTSKTREVVK
AALGFMKVLLSAYPDTVLAPHLKQIMSSLVSQKEDCKHHFRFKAKEIYAKLIKKFGYETI
FGLSPPSIHKVLVNIKKTQERAKKKKKEKEEESEEESDQEHFKSQPESMDELLRDTDSEE
EGEMKGARKPRDRTQAKLAWLQEGGDIMDFLDPSASKKVLATKPGEKREQKTKKKEAEFK
TAPDGRLIITESSDEEEPEKMAGDDEELDDLLNAIEQGAGNVKKTKKRKVEDLGSDEEGP
APKYKAGGGGIHRPIVKAKRSAPHDPASEYRAKKAGGDIKKTGKPDPYVYLPLNFQALNK
RKKAKMTGRFTNLVKGAKKGAKKGAKKKKM
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgagaaaaattcagcaaaaattagtaagtaaacaaaagaaggggaaagggaaa
cgatggaaaaaaggccagagtagcagcagtaatccggacatcaaaacatatcgagaggca
gcaaagaacagattcttccaaacatcaaaaggagaaagtagtttgactattgatgccttg
gctaaacatgacgagcaacagatagataaagacggagatgtcagcttcaaggcagagtct
gatgttgtcagtgcagctggaaaaacatttaatacctgggcaacgaactggactgagtgt
acgaacacaacctttggtcgtgtacataggtactgggcatcaaactcagccttccacaaa
gaggttctagctgtcctggctgctgttacagaggttataaaaacccagggaggctccgaa
tcggagaccgaatattttgcagctttaatgacggcactagagaccacagacagtgaagag
tctctagcagctgttacgtatctgcttagcttagtattaaaaagagttcccgccccggta
ctgaagagtcggttctcagagatcgccaaacagttcctggatgtccttgtgaagcacagt
gagggtcaatccacagcgctgcttaaatctttgttgctgtgcctggctttgttgctgaga
gtccaagagcaagcaacctggagcaactcctccacccagcgagtatatcagggccttctg
gcatttacagtccacaaaaaaccaaaggtcaggaaggctgcccatcaaggagtgaacatt
attctgagagggagctcctttatgacccagggagagacggccccaccctaccaccccgct
gggtcaatgaccgccaagttctgtatccaggttatagagcaatgtggaggttctggtgag
tcctcagacacacttcacatactgaccttgctgaaggacatcatgggtacattttccctc
aacagtgtcaaggccgtgtgtgagaccatcctcagggtcatgaccctcagcaatgtgatg
gtgacgtcgtgtggaatgaaggctctgtttggactgttcagtgggactcccaaaccaacc
actctgaatgcagaactgaatgcacagatcattacagctctgtatgattatcaaccatca
gataatgatgttcagcccatgaaggcatggctagctgtgatggaggctgctcacaaaaac
cttgcaagactggatgagaagttgtgtctgagccatctgccacgagttttctccatctgt
atgacctgtctgttgtcagagagaatggaggtggcttgcagtgctacaaaaaccatgaag
gagttgttgaaggcatgcctggcccctgctatggacggtatcagtgtattagtgacctca
gcgccatctggtgctaacacgcctctacataaaattatcaaagccttggacacaggactg
gggtaccagtttcatgcagcatggggactagtcttacaggtgtttgcagtattatttgag
gttgctggaaaagagtgtcctttgcttttcaaaaagagtgtcctgtcaatcgccaacctg
cgggacagtcccagatttccttataaagcagagcttgaccacgctatcggagcagccgtc
aaatatctgggaccacggcacgtcctggaagctgtgcctctcaacatcacaggagacgat
gatgactacacctttcctcgtagctggttgattccagtaatcagagacaatgttggaaac
acagagttagggttctttacgacctactttctccctctggctgctaaactcaagaagaga
tctttggaggcggagtcaactggtaaccaagtggtgtgcaagtcttacgacgctctacag
aggcaaatctggtccttactaccaggcttctgtaaccaacccacagacctcacacagtca
tttaaaggaatctgtaagatccttgggtcggccatcagtgagcgagaagacctgagggtg
gaggtcatgtctggtctgaggaagctcatcaacaagagcaaggaggacgaggagtgcaag
aaagaggtggcaaggtttgccaaaaacttcctgccgatcttgttcaacctttttacgaca
gaaccagagaacaccaagtacacgacccgattggctgtcctagaaaccacaaagtgctac
ctaaacatagcggacactgcgcttgtgaacacatactgtgataaatgtaaagaaaaattc
catgaagaaggcatttcatcatttaaaaggcaagctttgctggatcttcttcttgtgatg
ttacctcttgtagaggaaatgcgggtgaaggaaattttccaacttgtgacacagtttctt
tcagacacagacaagactttacagaagaagtgttaccgagtgttagaggacctgtgtggg
agcccctcccccgcctgtcaggggttccttacccagaacctacccggtatccagggggtg
ctgcttcagtccctctctagttccagtccctcatcaaaagcgcctcgtctgcgctgttta
atcaacatattcaagttattgccagaggagcagaaggacttcttgttagctgttgtacca
gaggcaattctgtgcaccaaagagataggagagaaggctcgctctgcttcatacctactg
ttggtggagatgggccgtgccaagatacgatggaataaagatgaacacggtgccctggag
gactacttccagatggtgatggcaggacttgggggttcccctcagatggtcagctccacc
ctgctggctctcacccgcattctctacgagttcaaagcctccatcagttcctcgttactg
gagacaatcgtggagaacttgtgtatattactgacatccaagacgagagaagtggtcaaa
gcagctctgggcttcatgaaggtccttctctccgcctacccagacactgttctggcacca
cacttaaaacaaattatgtctagtcttgtatcacagaaagaggattgcaaacaccacttc
aggtttaaagccaaggaaatttatgccaaacttatcaagaaatttgggtatgagacaata
tttggcctctcaccaccaagtattcacaaggtgttggtaaacataaagaagacccaggag
agagcgaagaagaagaagaaggaaaaagaggaggagtcggaagaagagagtgatcaggag
cacttcaagtcccagccagagagcatggatgagcttctgagggacactgactctgaggaa
gaaggagagatgaagggggcacgcaaaccaagggacagaactcaggctaaactggcctgg
ctacaagaaggaggggacatcatggacttcctggaccccagtgcatccaagaaagttctc
gccacaaagccaggagaaaagagagaacaaaagacaaagaagaaggaggcggagtttaag
acagctcctgatggacgcctgatcattactgagtcgagtgatgaggaagaacctgagaaa
atggcaggtgatgatgaggagttagatgacttattgaatgccattgagcaaggtgcaggg
aatgttaagaaaaccaagaagaggaaggtggaggatttgggatctgatgaagaagggccg
gcacccaaatataaagctggaggtggaggcatacacagaccaattgtgaaggccaagcgg
tcggctcctcatgaccctgccagtgagtacagagccaagaaagccggaggggacatcaaa
aagacgggcaagccggacccctatgtctacctcccactcaacttccaagctctcaacaag
aggaaaaaggcaaagatgactggtcgatttacaaatctagtgaaaggagcaaaaaagggg
gccaagaagggagctaagaagaagaagatgtga
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