KEGG   Magallana angulata (Portugese oyster): 128182470
Entry
128182470         CDS       T09348                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
canu  Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:canu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:canu03036]
    128182470
   03400 DNA repair and recombination proteins [BR:canu03400]
    128182470
Chromosome and associated proteins [BR:canu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    128182470
DNA repair and recombination proteins [BR:canu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     128182470
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ TPR_TTI1_C IFRD Adaptin_N
Other DBs
NCBI-GeneID: 128182470
NCBI-ProteinID: XP_052707064
LinkDB
Position
4:14858036..14870441
AA seq 1002 aa
MSAPMWKSEVEKYIKLLENSAVEVLSNGLQGKSVSLLELVESIGEHLTSEDHEIRGRVIK
LLSEVLGKLPNTVLSPMEVKTMVTYLCERLQDHHSIQPQALKGILTLVTGNGSNLPEGCA
DMICRSIFKEVQVQTLSQTDRCAVYNIYSTLLSHKLPELQKMGNDFVFGFIQSMDTEKDP
RNLLLAFHCARTIILNFSLGPFVEEMFEVTSCYFPIDFTPPPNDEFRITREDLISGLRGC
LSACPEFGPLGVPLLLDKMQSDVQSAILDSLLTLAESAVVYGSKCIKEFQAPLYRCIKQE
IFSPRTPELASAAETALTAMSAALSPQPGLSTEDSDVDVFIKEVMQDSKRHFLDEDVRLF
VPSCRLLLALALGSDHACCAVVGQTVPLLEDLYNKFTGATQRKQIIEMLVKFLCSCKTFA
GGKAPKVVSEMISSSLKILMSSTSQSNGTLTSAAVQGLGQVLTLPGVLASEDMKTSCWCI
LEQVLNSEDKLVRSSCVEPCKEMMKVYPEISTEILPKLIEKINPEEGEAILPFVAIFSVH
KSVISKTTEQLMSKLQQESQAMSESALQTCLWITSCLVDISVYARGNSDCVSVLSLETVP
AVYKMCASNAVSDNYSDVLSSPQVLQTLSVFIRNITTLLDSGTYAKLYTLVTKLYCEDSY
SNTTQQKSFRPLQVDSPSEQTCLVTLLTPTLCSSPNQFTMPDIQKYRELLTDLSLRSNQD
YTRSESAKCLAGILNKAPDDEEMAVYLQQRRDFYVQTLTSTSTDTSCLQQCVWVTKALVM
RGHKEANKFVNILLGLLDSEFLGDRAAEGVGVVLTVYEDVLNLSMHANIRMLYKQRFFTE
NSSRLTEGFQNASAGTKKNYLIALSHCLQSLPKSVLVRELPQLFPLLVQSLLCDNVQLQQ
STMDALCTMITDAPDFLVKHVDSVIPQLLKLTTYKPAMRVRTSALRCLLELVSLPAPVIL
PYKPQVVRSLEGVLDDKKRLVRLEAVKARNEWCLLGEPGGKK
NT seq 3009 nt   +upstreamnt  +downstreamnt
atgtctgcgcccatgtggaagagtgaagttgaaaaatatatcaaacttttggaaaattct
gcagttgaagtccttagtaatgggcttcaagggaaatctgtttctcttcttgaactcgtg
gagagcattggggagcatttgaccagtgaggaccatgagatcaggggacgtgtgatcaag
ttactgtccgaggttcttggcaagcttccaaacactgtcctttcaccaatggaagtgaag
acaatggtgacttacctttgtgagagacttcaggatcaccactccattcagcctcaggcc
ctcaaaggcattctgactctggtgacagggaatggatcaaatctccctgaggggtgtgcc
gatatgatatgccgctcaatattcaaagaggttcaggttcaaaccctatcacagacagac
aggtgtgcagtgtacaacatttattccacattactcagccataaactcccagaactacag
aagatgggaaatgattttgtgtttggctttattcagtccatggatacagagaaagaccct
cgcaatctcttattggcattccactgtgctagaaccatcattctgaatttctctttaggt
ccctttgtggaggagatgtttgaggtcacttcttgttatttccccatagatttcactccg
ccacccaacgatgagttccgaatcactcgggaggacctgatctccggattacgtggatgt
ctgtcagcctgcccggagttcggacctttgggtgttcccttacttcttgacaaaatgcag
tcggatgttcaaagcgccatattggattccctgcttacactggctgagagtgctgttgtg
tatggatcaaagtgtataaaggagttccaggctcctctctacaggtgtatcaaacaggag
atatttagtcctaggacaccagagctggcgtcggctgcagagactgccctcactgctatg
tcagccgccttgtccccacagcctggtctttctacagaagattcagatgtagatgttttt
atcaaagaagtcatgcaagacagtaagcgtcacttcctggacgaggacgtacgactgttt
gtcccctcatgtcgcctgctccttgccctggccctggggtcagaccatgcctgctgtgct
gtggtcggtcagacagtgcccctcctggaagatttatacaacaaatttaccggggcaacc
caaagaaaacagataatagaaatgctagtcaagtttttatgcagttgcaagacctttgct
ggaggaaaggctcccaaagttgtatcagaaatgatatcatcgtctctcaagattctaatg
tcgtcaacatcacagtcgaatggaaccttgacctcagctgcagttcaaggtctaggtcaa
gttttgaccttgcctggtgttctcgcatcagaggatatgaaaacgtcctgttggtgcatt
ctagagcaagttttgaactctgaagataaacttgtaaggagttcttgtgtggaaccatgt
aaggaaatgatgaaagtttacccagaaatttctacagaaattctaccaaagcttatagag
aaaattaatccagaagaaggagaggccattttgccatttgttgccattttttctgtccac
aagagtgtgatatcaaagacaactgaacaattgatgtccaaactacagcaagaatctcaa
gccatgagtgagtcagccctacagacttgcctgtggattacatcatgtttagtagacatt
tctgtgtatgccagaggaaattcggactgtgtatctgtgttgtctttggaaacggtcccc
gctgtttacaaaatgtgtgcatctaatgctgtgtctgataattacagtgatgtcttgtct
agtccacaagtacttcagactctgtctgtgttcatcagaaatatcaccaccttgttagat
tcaggaacatatgccaaactgtatactttggtcacaaagctttattgtgaggattcttac
agtaatactacacaacagaagtctttcaggcctttacaggtggattcaccttcagaacag
acttgcctggtgactctccttacacccacgctctgctccagtcctaaccagttcacgatg
cctgacatccagaaatatcgagaactactgactgatctgtcactcagaagtaaccaagac
tacaccagatctgaatcagccaaatgtttggcaggaatcttaaataaagctccagatgat
gaagagatggcagtgtatttacaacaaagacgagacttttatgtacagaccttgacctct
acaagtacggacacttcctgtctgcagcagtgtgtctgggtcacaaaagctcttgtcatg
cgaggccataaggaggccaacaagtttgtaaacattctgcttggtttgctggacagtgag
ttcctgggtgaccgggcagcggagggggtgggggtcgtactcacagtgtatgaggatgtc
ctgaatctgtccatgcatgccaacatccgcatgctctataaacagagattcttcactgaa
aattctagccgcctcacagagggatttcaaaatgcatcagcagggacaaagaagaactat
ctgatagccctgtcccactgtctgcagtctctacccaagtctgtccttgtgagagaactg
cctcagttgttccccttgttggtccagtccttgctgtgtgataacgtccagttacaacag
tccactatggacgcgctgtgtacaatgatcactgatgcccccgacttcctggtcaaacat
gtagactcggtgatcccccagctcctgaaactgaccacctacaaaccagcaatgagggtg
cggacttcggccctgcgatgtttgctggagcttgtttccctgcccgcccctgtgatctta
ccctacaaaccccaggtagtcaggtcactggagggcgtgctggacgacaagaaacgactg
gtcaggctggaggctgtgaaagccaggaacgagtggtgtctattgggagaacctggtgga
aaaaagtga

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