Magallana angulata (Portugese oyster): 128183108
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Entry
128183108 CDS
T09348
Name
(RefSeq) uncharacterized protein LOC128183108 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128183108
03009 Ribosome biogenesis [BR:
canu03009
]
128183108
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128183108
Spliceosome [BR:
canu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128183108
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
90S particles
Helicases
128183108
Pre-60S particles
128183108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
128183108
NCBI-ProteinID:
XP_052707945
LinkDB
All DBs
Position
5:2978108..3065821
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AA seq
650 aa
AA seq
DB search
MGKQKKIPKVLPSKAKMKGLKKNLKDSSTSSNKEKPSRIADISKDVEDSSDENEFDEIDE
EIVDDRQVNDSDENEAESDDDDDDDDDDDDDENLEEEEEEVDDKDSKKRKLKPDQFESDK
SPKKKMKTDSESKETQKEEQKLPGKTSGGGILTDTSFSSLQGVISDLSLKGIADMGFIHM
TEIQANTIPHLLEGRDLMGAAKTGSGKTLAFLLPAVELLNKLKFMPRNGTGCIIISPTRE
LSMQTFGVLKELLKYHCHTYGLIMGGTSRVEEAKKLGKGINILVATPGRLLDHLQNTPNF
MYKNLQCLIIDEADRILEIGFEEEMKQIMKLLPKRRQTMLFSATQTRKVKDLSRISLKKE
PLYIGVDDRKDSATVEGLEQGYVVCPSDKRFLLLFTFLKKNRKKKVMVFFSSCMAVKFYH
ELLNYIDIPVMCIHGKQKQTKRTQTFFQFCNSKESILLCTDVAARGLDIPRVDWIVQYDP
PDDPKEYIHRVGRTARGEGGVGHALLILRPEELGFLRYLKHAKVPLNEFDFSWSKISNIQ
AQLEKLIEKNYFLHKSAQEAYKSYIRAFASHSLKNIYDVNTLDLQKVALSFGFHNPPYVD
LDVHGKKGGKSKSHRGKPGGFGYSRDKFENKAKIYKPIKSKGHNKRQFSR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcagaaaaagatcccaaaagtattgccgtccaaggctaaaatgaaaggtttg
aagaagaatttaaaagattccagcacaagtagcaataaagaaaagccctcaaggattgct
gatatcagtaaggatgttgaggatagtagtgatgaaaatgaatttgatgaaattgacgaa
gaaattgttgatgatagacaagtcaatgatagtgatgaaaatgaagcagaaagtgatgat
gatgatgatgatgatgatgatgatgatgatgatgaaaatttagaagaagaagaagaggaa
gttgatgacaaagacagcaaaaaaagaaagcttaaacctgatcagtttgagagtgacaaa
tccccaaagaaaaaaatgaaaacagacagtgaatctaaagaaacacaaaaagaggaacaa
aaattacctgggaagacgtccgggggagggattctgactgacacatccttctcatctctc
cagggcgtgatctctgacctctctctgaaaggaatcgcagacatgggcttcattcacatg
acagagattcaggctaacacaatcccacacctgttggaaggaagggatttgatgggagca
gctaagacaggtagcggtaaaacactggctttcctcctaccggctgtggaactcctcaac
aaactcaagtttatgcccagaaatggaacagggtgcatcatcatctcaccgactcgagag
ctgtccatgcagacgtttggggtcctgaaggagctactaaagtaccactgtcacacctac
ggtcttatcatggggggcactagtcgggtggaagaggccaagaaactcggcaaaggcatc
aacatcttggtagcgacccctggacgattacttgaccatctgcagaatacgccaaacttc
atgtataagaacctacagtgtctgataattgatgaggcagaccgaatcctggaaatcggg
tttgaggaagagatgaaacagatcatgaagcttttgccaaagaggcgacagaccatgtta
ttctcagccacacagaccaggaaagtgaaggacttgtcccggatatccctgaagaaggaa
ccgctgtatattggtgtcgatgaccgcaaggacagcgccaccgtggagggactggaacag
ggctatgtggtctgtccctcagacaagagatttcttcttctctttaccttcttaaaaaag
aaccgaaaaaagaaggtgatggtgtttttcagctcttgtatggccgtcaaattctaccat
gaacttctaaactacatagatataccagttatgtgtattcatggaaaacagaaacagacc
aagagaacccagaccttcttccagttctgtaattccaaggagtccatcttgttgtgtact
gatgtggcagctagaggtctggacatcccccgagttgattggattgtacagtacgacccc
ccagatgatcccaaggagtacattcaccgtgtaggtagaacagcccgtggagaggggggt
gtcggtcacgctctgttaattcttcgtcctgaagagttgggcttccttcgttatctgaag
catgctaaggtgccactgaatgaatttgacttctcttggagcaaaatctcaaatattcag
gctcagcttgagaagctgatagaaaagaactatttcctccacaagtctgcacaggaagcg
tacaaatcgtacatccgggcgttcgcctcacacagccttaagaatatctacgacgtcaat
actctagatttacagaaggtggcgctctcgttcggattccacaaccctccctatgtagat
ctagatgttcacgggaaaaagggaggtaaatccaaaagccacagaggtaaacccgggggt
tttggttacagcagagacaagtttgagaacaaagcgaaaatctataaaccaatcaaaagt
aaaggacacaacaagcgacagttcagtcggtga
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