Magallana angulata (Portugese oyster): 128183535
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Entry
128183535 CDS
T09348
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128183535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128183535
Spliceosome [BR:
canu03041
]
Complex C
Other components
Step II factors
128183535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_VPS8
PQQ_2
Beta-prop_NOL10_N
US22
Motif
Other DBs
NCBI-GeneID:
128183535
NCBI-ProteinID:
XP_052708537
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All DBs
Position
5:30145247..30153216
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AA seq
571 aa
AA seq
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MHCIQNYDSDSSDGEDEKQETTDDLTAHLKPLDPDKKSITTIALNAAPVIATKAKIEQKR
HIGHSVKEVTYNPKYDELYAPQVGPANPYKTRQMSAVRNTLSGFAEAAHVSNFEFENQRR
TFHSYGYAMDPSEGNSVVSEPVLVGDEVAKEENKGKTVFESAKKRPEDKRKRLRNDNPGD
IEGYLGPWGKFIDEKTVMKPNEEEKKELDEILAKRSKSSKQTEEKTADEKTTLHIKDAYD
YQGRSFLHIPQDVGVNLKSDEPPEKCFLPKKQIHTWTGHTKGVSAIRWFPRSAHLLLSCS
MDCKIKIWEVYNDRRCVRTYSGHKQAVRDITFNNSGTEFLSCGYDRYIKLWDTETGECKS
RFTSRKVPYCIKYHPEEDKQHLFVAGTSDKKIVCWDIRSGEIVQEYDRHLGAVNTITFVD
HNRRFVSTSDDKSLRVWEWDIPVDFKYIADPSMHSCPAVQLSPNGKWLACQSMDNKIIIF
NVLNRFKYMRKKTFTGHMVAGYACGVDFSPDMSYLISGDADGKVYVWDWKTTKLYNKFKA
HDDVCVGVLWHPHETSKVATCGWDGVIKYWD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtatccagaattacgatagcgattcttctgacggagaagacgaaaagcaagaa
acaacagatgatttgacagctcaccttaagcccctcgatccagataaaaagtcaattacc
acgattgctctaaatgctgcccctgttattgcgacaaaggcaaaaattgaacaaaaaaga
cacattggtcattctgtcaaggaagtgacatacaacccaaagtatgatgaattatatgca
ccacaggtggggcctgccaatccatacaaaactcgacagatgtctgctgttcgtaacacg
ctgtcaggttttgccgaggcagctcatgtcagcaactttgagtttgagaaccagagaaga
acattccatagctatggatatgctatggatccctctgagggtaacagtgtagtgtcagaa
cctgtactggttggagacgaagttgccaaggaggaaaataaaggtaaaactgtgtttgag
tcagcaaaaaagagaccagaagacaagagaaagaggttacgcaatgataacccgggagac
attgaaggatatcttggaccctggggcaaatttattgacgaaaagacagtcatgaaaccc
aatgaagaagagaaaaaagaactggatgaaattcttgccaaaagaagcaaatcctctaaa
caaacagaagaaaagacagctgacgaaaaaacaactctacacattaaggatgcctacgat
taccaagggagatcattcttgcacatcccacaggatgtgggcgtcaaccttaagtcggat
gaaccaccagagaagtgcttcctgcccaagaaacagattcacacctggactgggcacaca
aagggggtgtcagccatccgctggttcccccgctctgctcatcttttactctcttgtagc
atggactgcaaaattaagatctgggaggtgtacaacgaccggcgctgtgtgcggacctac
agcggtcacaaacaggccgtgagggacataaccttcaacaactcgggcacagagttcctc
agctgtggctacgacaggtacatcaaactctgggacactgagacaggtgaatgcaagtct
cgcttcacgagtcggaaggtgccgtattgcatcaagtatcacccggaggaagacaaacag
catttatttgtcgctggaacctcagacaagaaaatcgtctgttgggacattcggtcgggt
gagattgtacaggagtatgacagacatctcggcgccgtgaacaccatcaccttcgtggat
cataaccggcgattcgtgtccacttcagatgacaagagtctcagggtgtgggaatgggat
attcctgtggatttcaaatacatagctgatcctagcatgcattcatgtccagctgtgcag
ctctcaccaaatggtaaatggttggcttgtcagtccatggacaataagatcatcatcttc
aacgtactgaacaggttcaaatacatgaggaaaaagacatttacaggccacatggttgcg
ggttatgcctgtggagtggatttctcacctgacatgagttacttaatttctggagatgct
gatggcaaagtgtatgtgtgggactggaaaacaacaaaactgtacaacaaattcaaggcg
cacgatgacgtgtgtgtaggcgtgctgtggcacccccacgaaacctcaaaagtggccaca
tgtggctgggacggggtcatcaagtactgggactga
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