Magallana angulata (Portugese oyster): 128183643
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Entry
128183643 CDS
T09348
Name
(RefSeq) uncharacterized protein LOC128183643 isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128183643
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128183643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
KH_N4BP1_1st
zf-CCCH_2
zf-CCCH
zf-CCCH_4
KH_DEAH11_2nd
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
128183643
NCBI-ProteinID:
XP_052708706
LinkDB
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Position
5:22282902..22300579
Genome browser
AA seq
1244 aa
AA seq
DB search
MTIDDFYVDKSKEPLIESYKARVYKVFHVNIALCYDEDKLCTKICMSSADENGTSQNIKK
AKSYLESVTADGDSVSRIVLTLSQSDFAMVQQFQSRVERDSQAVVDLSKDNSQVCIFGKK
ENVSIAQALIDRMVKKDNSISPCIDIRLRGGHDESGFHEGSEFSYKNGSSSSGGVDFMKE
NGSSTCGDATEKTDISSVKHRTVESANKVSDVSVSGGKRPQRAHAALKRTMSVGMGPLPS
SLSEPRKNPLTKTVSYGNELRLAENSLSRLKLSHQSSTSSDDEETTDEEEYNTKIEFALK
LGYSESQLASVLKKLGNKAGQNEILSELIKLSTTSVDRDSKSSDEGNSSFCAMEGSSENL
LNFTPENCFDLSDSSSNFRHIVIDGSNVAMSHGNKEIFSCRGIQLAVDWFRERGHQAITV
FVPQWRKETSRIDAKITDQEILFQLEKEKILVFTPARRIGGKRVVCYDDRYILNLASDSG
GVVVSNDNYRDLVSEKPEYRKVVEERLLMYSFVNDRFMPPDDPLGRHGPSLDNFLSKEPR
QPEPLPPICPYGSRKCTYGNKCKFYHPERGNMPHKMVNEKLAEQAKQKIQEARENRKTQD
GSKSKQPLCKKPSRGKMAVSRTQSLTPKTHPDSLGAEAPVKRHSGDFGEVTVNIDSRDLE
NDEKWKSYNEKLSEHRKQMEQADIEHQRQRSDAKESQFSMVTMQSMEPFNMASKMEQQCG
SRSSSPMQRSTPSPQLMLQNEEFLSGHLMLAKKLSDEAGETKSHKSEERLFNRSPPIGYH
GNSPLATPVKQNKPPSQQQQQHQPLLMNQQLPPPPPPSHQPISQQFSHPVPMQHQHQKLS
RQYSLQGPQDPRLQRGQMAPAAHSTRTPFPQENYGAFGLARNPFSSSENFSTPPPPFSGR
PEHRYLGEESEHAALARMQSAPETLFTRNDNNSHKRFGRMVRQNSSSDTQLHLLGDLDLG
PNEYSLFPAEVLDFNRRCQQNQQFSSGMNAQRMGDPNRQLKTRAVGYTKQEYRSQHDNGE
TKWTFEPVLEHGAAYKSQFSGIQGIDAFESDYPPTPSWQNQDQLKFPVQESYHCPQQPYD
IFHEYGGLPFSQPHRTVEHCQSGGFSFQTPTSNLHAAPSNFCESQQHSMLQNPPSSSSCG
KQNIGVIGQEHKQSLSRTSSANLGGHPAPNQQSSAMNAMASPMMEGNGSRPKFTDFSPIQ
PTDSRYNLYYHLCGLFPEPKVRKVMNEHPEETSPQVLCALIIGM
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgactatagatgatttttatgtcgataagtcaaaagagccgttgattgaatcgtataaa
gcgcgagtgtacaaggtttttcatgtaaacatcgccctgtgttatgacgaggataaactg
tgtacgaaaatatgcatgtcatcagcggatgagaatggcacatcgcaaaacattaaaaag
gcgaaaagctaccttgaatccgtaacggcagatggagactcagtgagtcgaattgtcctg
accctctctcaatctgatttcgccatggttcagcaattccagtcgagggttgagagggac
tctcaagcggtagtggatctatcgaaggacaattcacaagtgtgcatctttgggaagaag
gagaatgtcagcatcgcccaagccctgatagacagaatggtgaagaaagacaacagcata
tcgccctgtatcgacatacgattacggggaggacatgatgagagtgggtttcatgaaggg
tcagaattttcatacaagaacggttcaagtagtagtggaggtgtagactttatgaaggaa
aatgggagttcaacctgtggtgatgcaacagaaaagacggatatatcatcggtgaaacac
cgtacagtggaaagtgctaataaagtttcagatgtctctgtgtcggggggaaagagaccc
caacgggcgcacgctgccctgaaaaggaccatgtcggtggggatgggtccccttccgtca
tccctatcagagccccgaaaaaatcccctgaccaagacggtgtcatacggcaatgaactg
agactggccgaaaactcgctgtccagattaaaactctctcatcagtcctcgacttcttca
gacgacgaagaaacgactgacgaagaagagtacaacacgaagattgagtttgcgctcaag
ttgggatattccgagtcacagctggcatctgtgctgaagaaactcggcaacaaagcggga
cagaacgagattctgtcggaactgatcaagctgagcacaacgagtgtggacagggactca
aagagcagcgatgaggggaactcgagtttctgtgcaatggagggttcttcagagaacctt
ttgaacttcacccccgagaactgtttcgacctttcggattcttcctcaaattttcgtcat
attgttatcgatggtagcaatgttgcaatgagtcatggcaacaaggagatcttctcgtgt
cgagggatacagctggctgtcgattggttcagagaacgaggtcaccaagccatcaccgtc
ttcgtgcctcagtggcggaaagaaacctcacgcattgatgccaaaatcacagatcaggag
atactgtttcaactggaaaaagagaagattttggtgtttacacccgcacgcagaatcgga
ggaaagagagtggtgtgctatgatgatcggtacatcttgaatctagcgtcggacagcggg
ggcgtcgtggtctctaacgataactaccgggatctggtcagcgaaaaaccagagtaccgc
aaagtggtggaagagaggcttctgatgtactcctttgtcaatgacaggttcatgcctcca
gacgacccgttgggccggcatggtccgagtctggacaacttcctgtctaaggaaccccgc
cagccagagccactgcctccgatctgtccgtacggcagcaggaagtgcacctacggaaac
aagtgcaagttctatcacccggagcggggcaacatgccccacaagatggtcaacgagaag
ctggcggaacaggccaaacaaaaaatccaggaggcacgggaaaatcgcaaaacccaggat
ggaagtaaatctaagcaacctttgtgcaagaaaccttcccgaggtaagatggccgtgtca
aggacacagtcacttacccccaaaactcaccccgacagcctgggagcagaagccccggtc
aaacgccacagtggggactttggcgaggtgacggtaaacatcgacagccgggacctggag
aatgacgagaagtggaagagttacaacgagaaactgtccgagcaccggaaacagatggag
caggcggatatagaacaccagagacagagatctgacgccaaggaatctcagttcagcatg
gtcacaatgcagagtatggagccgttcaacatggccagtaaaatggagcagcaatgtggg
tcaaggtcgtcctctcccatgcagaggtcaacaccgtccccgcagctgatgctgcagaac
gaggaatttctcagcgggcacttgatgctggccaagaaactttcggacgaggccggggag
actaaatcccacaagtcagaggagagactatttaaccgaagccctcccataggttaccat
ggtaacagcccgttggccacgcctgtgaagcagaacaagcccccctcacaacaacaacaa
caacaccaaccgctactaatgaatcaacagctccctccccctcctcctccatcacaccag
cccatctctcaacagttttcccatccagtgcccatgcagcaccagcatcagaaactcagc
aggcagtattctctgcaaggacctcaggaccctcgccttcagcgtggccaaatggctcca
gcagcacattccaccaggacaccttttccgcaagaaaactacggagcatttgggctggca
aggaatcccttttcatcatcagaaaacttttccacccctcctcctccctttagcggcagg
cccgagcatcgttacttgggagaagaaagcgagcatgcagctcttgccagaatgcaaagt
gcgccagagacgcttttcacgaggaatgacaataactcgcacaagagattcgggagaatg
gtccgtcaaaacagttcgtcggacacgcaactccaccttcttggagacctggatctcggt
ccgaacgaatacagcttatttcctgcggaggtcctggatttcaacagaagatgtcagcaa
aatcaacagttctcctctggtatgaatgcacagcgaatgggagatcctaatcgtcagttg
aaaaccagggcagtgggttatacaaaacaagaatatcggtcgcagcacgacaatggagaa
accaaatggacttttgagccagtcttggagcatggtgccgcctataagagccagttttct
ggaatccagggcatcgatgcgtttgaatcggactatccacccaccccgtcatggcaaaac
caggaccagttaaaattcccagtgcaagaatcttatcactgtccacaacaaccttatgat
atatttcacgagtatggaggactacctttctcccaaccacacagaactgtagagcattgt
caatcagggggcttcagttttcagacaccaacttccaatttacatgcggccccctccaac
ttttgtgaaagtcaacaacattccatgttacagaaccccccctcctcctcctcttgtggc
aaacaaaacattggggtcataggtcaagaacacaaacagagcctgtccagaacgtcgtcg
gcaaatctaggcggccatccagcccccaatcagcaaagttcggccatgaacgcaatggct
tcgccgatgatggaaggcaacggaagtcgaccaaagttcacggatttctcccccatccag
ccgaccgacagtagatacaatctttactaccatttgtgcggactctttcccgagccgaaa
gtgagaaaagtgatgaacgagcaccctgaggagacaagtccccaggtgttgtgtgcactc
atcattggcatgtga
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