Magallana angulata (Portugese oyster): 128183646
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Entry
128183646 CDS
T09348
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128183646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
canu03021
]
128183646
Enzymes [BR:
canu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128183646
Transcription machinery [BR:
canu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
128183646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
128183646
NCBI-ProteinID:
XP_052708708
LinkDB
All DBs
Position
5:complement(3901997..3918152)
Genome browser
AA seq
769 aa
AA seq
DB search
MAGHRCLLFLVHLPLKRIADMTIPKPQAAQFDIIKHMRQDQITNGLVNAISTGNWSIKRF
KMERAGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEA
CGLVKNLALMIHITTDMEEEPIIRLAFNLGVEDIQLLSGEEMTSSRVYLVFLNGNILRVI
RDHKKLVRTFRLMRRSGYISEFVSVCTNHTHKCVYISTDGGRLCRPYIIVQKGQPLVKQR
HIEELTQGFRSFDDFLKEGLVEYLDVNEENDCMISLYESGITRETTHLEIKPFTILGVCA
GLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLCYPQAPLVKSKTIELIH
FDKLPAGQNATVAVMSFSGYDIEDALVLNKASLDRGFGRCLVYRKQACTLKRYTNQSFDK
VMGQMVDASTHKPIWKHEALDSDGICSPGERMENRQVLVNKWMPTVTMNPIQQSPTTQGP
PQGPEYREVPITYKGAEACYIEKVLISSNPEEAFLIKILQQQTRRPEIGDKFSSRHGQKG
VCGLIVPQEDMPFTDLGICPDIIMNPHGYPSRMTVGKLMELLGSKAGVLEGKFHYGTAFG
GDKVCDLSEDLVKHGFNYLGKDFVTSGITGEPLEAYIFFGPIYYQKLKHMVLDKMHARAK
GPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGECGL
LGYSGXCEFCKSSRHVSTLKMPYACKLLFQELQSMNIVPRLSLKRYNEV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcacaggtgtttattgttcctggtccacctacctctgaagaggatagcagac
atgacgatccccaaaccccaagcggctcagtttgacatcatcaaacacatgcgacaggac
cagatcactaacggcctggtcaatgctatctctacagggaactggtccatcaagagattc
aagatggagagagctggagtgactcaggtgttatctcgtctctcctttatctcggccctg
gggatgatgactcgcatatccagccagtttgagaagacgaggaaagtgagtggtcccagg
tctctacaaccgtcacagtgggggatgctgtgtccctccgatacaccagaaggggaggca
tgtggattggttaaaaacctagctctgatgattcacatcaccacagacatggaggaggaa
cccatcatccgcttggcctttaatctgggggtggaagacatccagctactcagtggggag
gagatgaccagttccagggtctatctggtctttcttaatggtaacattttgagggtgatc
cgtgaccacaagaaacttgtacggactttccggttgatgcgacggtcggggtacatcagt
gagtttgtgtctgtgtgcacaaaccacacccacaaatgtgtctacatctccacagacgga
ggaagattgtgtaggccttatatcattgtacagaagggacagcctcttgtcaaacagaga
cacatagaggagctgactcaggggttcagaagttttgatgacttcctgaaggagggactg
gtggaatacctggacgtgaatgaggagaacgactgtatgatctcactgtacgagtcagga
atcaccagggaaacaactcacctggagatcaagccgttcaccattctgggagtctgtgct
ggattgattccctacccccaccacaaccagtcccccaggaacacctaccagtgtgccatg
ggcaagcaggcgatgggtaccatcgggtataaccagaggaatcgtatagacaccttgatg
tacttgttgtgctacccacaggcacctctagtcaaatctaagacaattgagcttatccac
tttgacaagttaccggccggacaaaatgccaccgtcgcagtgatgagtttcagcggctac
gacattgaggacgcccttgtcctgaacaaagcttctcttgatagaggttttgggcggtgt
ctagtgtacaggaagcaagcctgcaccctgaagcgctacaccaaccagagctttgacaag
gtgatgggacagatggtggacgccagcacccacaaacctatctggaaacacgaggctctc
gactccgacgggatctgctcgccaggggagagaatggaaaaccggcaggtgcttgtcaac
aaatggatgcccactgtgacaatgaatccaatccaacagtcgcctacaactcaaggacct
ccacaggggccggagtatagggaggttcctataacatataaaggagcggaggcctgttac
atagagaaggtgctgatttcgtccaatccggaggaggctttcttaatcaagatattacag
caacagacgcgtcggcctgagattggagacaaattcagcagcagacacggtcagaaaggg
gtttgtggattaattgtcccacaagaagatatgccattcactgatctgggtatttgtcca
gacattataatgaatccccatggttacccgtccagaatgacggtcggtaagctgatggaa
ctgttgggaagtaaggccggggtcctggaagggaaattccactacggaacagcatttggg
ggagacaaagtctgtgatttatcagaggatctcgtaaaacatggatttaattatctcggc
aaggactttgtaacctcaggaataactggggagccgctggaggcctacatattctttggc
cccatatactatcagaaactgaagcacatggttctagataagatgcatgcccgagccaag
ggaccgagagcggtactgactcgacaacctacagaggggcgatctcgagatggaggtctg
agattgggcgagatggaacgagattgtctcattggttatggagcaagcatgctgctactg
gagagactgatgatatctagcgacgcctttgaggtggacgtatgcggagaatgtggactc
ctgggatactcaggctgatgcgagttctgtaaatcctcacgtcatgtctccactcttaaa
atgccgtacgcctgtaaactgttgttccaggagttacagtcgatgaatattgttccaaga
ctatctctaaaacgttacaatgaagtctag
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