Magallana angulata (Portugese oyster): 128183809
Help
Entry
128183809 CDS
T09348
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
canu03009
]
128183809
Ribosome biogenesis [BR:
canu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
128183809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
NYD-SP28
SCD
Motif
Other DBs
NCBI-GeneID:
128183809
NCBI-ProteinID:
XP_052708925
LinkDB
All DBs
Position
5:32592042..32629448
Genome browser
AA seq
2778 aa
AA seq
DB search
MGKSKAENTFKFQSFTERIAGVNIDVIHKIRHHDDTPDETSTYFCEALQKWSELNCTEHF
TNFRKEISDQVQTFAQLVHHKEEIIAALKTHLAIPDSLALGPLLNLLVQLARDLQTDFYC
YFHDFFDLLLNLLSKNAQDPELLEQIFSALSYIFKFLWRYLVRDIKDVYQYFSTLLRKNN
REYIVNFAAESFAYLMRKVKNHGELFDFLFLTLEESPETAEGVGRLLFEMVKGVQKQFHS
CTQKTFPIVLKKLEECQDGKYEQLPWDHVESAVTEMFVAMAKHTDKKNSSEIWKVLISGV
DEVHKCWEKAAKKNKEKISTHLLRLLRLMGMWINHKGGKIIAEPETVAQCLLSMLRGDHL
PEAVGGQLLEDVSSLLVTCTTVLPVETTVKLVTSVFKTKYPESLVFSFTRAVLDLPIFEK
DVLPSLLPYCHQVMSGRDQASHELTIHLLTHVTQQKAPPPTDGSELAQLQAYMMDFGVTK
KTGVPNHIMSALKTVSASDIVKGVSDLPDVWSALVLLPHVRPILDKKEAIQCVTSLFMNL
LKSVSADTNEISKGEILHIMYHCLLALLYMQEDGEMFEWIPQAEVASLLSHYPENITVLE
MADLYFTQALLDGSTSVTSEESLLQVYQSLEKNLTSPFSKVRMLTLRILSQFSFRLPAQE
DGDPNRLDVFRICLEAELVPLNVQDFRRKLLFLQKLQFDIVQKSIPVGPFTLVPLRYLIG
ALHINFKLLWEPLTKLIASHAAGLDKTVFWELYRQTLQDAAHKCEEAIYQTENKPNPEEE
EESMEEDDSLRQLFVESYRSHDTAEKPDEVNFRFYLWKSMRLFPELCEKKNRDVVPLFFD
FISKEYYNVDLSAAPTQNILKKETQVSAEAEEEEEVEEEEDEEEDHVLTRTESKKKEEEK
IERKRKKSESKSELEEDIDEGHKKGGKQKKGRLQGKMVKPGKSDGSRLKSRAATSGLLVH
LELFSKFTSPKSLYREAELRQLYEQLLLHKNGKVQRVAFSCIMTYKHRYLVPYRENFENL
LDDAKFKTEIVLFSIDHENSIISTEHREQVLPILMRILYGKMHSKTGKDSAGKSNSQFRR
SIVFRFLNGCSGDEIIKFMEMVFENFKHFVTDDILAMVCKTEKELDLSKMIPLRKMTGAL
NTVDMIVKKLGHLIEGYLPSLECILLGLTATCVACLERREEVTPGALKPLKNLRQLCIAQ
IQQFYDIFDSYKFSPKEIDAMFHVAVWPQLSKLQFEGIYHPTPLLKLLHMCATNRRYWTL
LAKCHDSDMTLTPISAVLRLLNAKDVSKTVTDFIIVMLDNLLSREEDEEMESITTATPVK
VNKMMHISVLEVEQFGVELLKPHVSDILTYIQRAIKNIKGQGKKSQAAGKELSILSRISE
FVTDQSACLSLIELLLPFLGEGLSRTPDTEINILNSIRNLLEKVEDKKKFYRHISKLFGY
IQNRQSRILICQLIQVIANSNQDLKDISQLLTEMNAWDPKHTEEPDYIKRLNAHKKVNEA
IKKMEEKLDVDFLIPVLHSCCYCIKMVDDMSLRDNATHTLVTMVKQFSVVTYDQDDFREL
ISNGLVQEVKAGFKNKKETVRHEFIALLSVLVDTFPSHDMFADLVVLKDKDVEADFFENI
RHIQTHRRSRALKKMKRILYSRSVRKEILVSYLLPLTSSFLLDETYTKAQGLQESAIDSM
ATLCKQLPWHVYIHQLDYFLSMLSKKFEKKKLLVRVIVGILDAFHFDLRNSQHAVVNLPD
AIAKKKAKGEITEEPNPLEDTEMESTKEEAIPMVPEEEDETTATTPDPLSKQPDRMVICS
VGQATRIHCTIMKSVIPHLQRSLTKKEKSEDEHKLVRKNIAEDSEVLRVPIALAMIKLLQ
NLPHKSLEHNLPGILLKVCNFLKSRAVEIRNTARDTLVQITTSLGPRFFPFILSELRGTL
RKGYQVHVLCYTVFVLLKNLLPVLKPGDLSVCRKSLQDVFHEDLFGQVAEEKEVAGVTTK
LFEARSSKSYDSYRILAQVISRDSLMAFITPLKEVLVSTHSHTIARKVQEVLKKVVTGLL
DNPGLDTESLMIFTHGLITQSFPQLSENQSKKNKGEDKDTQTFRPQSCLLLPHEPKRGGD
KPKLSKKTNIHVLVEFGLQLMSLCLRRGRLVATEEEHRKLVDPFITILADCLFAKHIRIN
TLSLRCLCWLLKFDLPSVNSHITKLANGMFILLKNYASAGASKGENLELISMAFKAVTVL
VRDVKIYKLEQTQLQVLLTFCEEDLYDYNRQSTAFSLLKAILSRKLNVPEVLELIRKVED
MSITADSPHVRRECRQIALQYILEYPLGKLLNKHLEYYVTQLSYEMEMGRESALEMLATI
FSSFPQNILNDHAGMFFIPMSAALVNDESTKCRKLTALAIKSLLQKIDHNSRVELFNITQ
KWFTDDKINHRILAAQLTGLFIEVESAKFSHHLSVILPIIQQQIDPGRYSDNSGGSEGET
EKDRLLFNCLNTLLKLLRECDLIRDAKWTDDMNLIWESIISHLGYEHMWVQLASCQLIGL
LFAAWTPEEILQPVEKSGQTDFIKTDSINKLESLALDLITQLQSKYLTDELANQIIKNMV
FIAKVAKLLSDIESSSDSVEQKGQRGSKGKKCLSLRWLVKKMVREANHEAVNQPKTTIKR
SSVFKWIAALSMDLGPTLLPSVVPIVMPALQRETNENNPNTDSALKSLAQEVLDIMRKIL
GVETYTQLFAKTHKEQYDRKESRKRKDAVEAVSNPQYAAKKKMKKNLAKREAKKRKLEEF
RVSKKIKKRKVKDMAFTS
NT seq
8337 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcaaaagcagaaaacacatttaagttccaatcgttcacagagaggattgca
ggtgttaacattgatgtcatccacaagatcagacatcacgatgacacccctgatgaaact
tcaacatatttctgtgaggcattacaaaaatggtccgagttgaattgcacagaacatttc
acaaactttaggaaagagataagtgaccaagtacagacctttgctcagttagtccatcac
aaggaagaaataatagctgctttaaagacacacttggctattcctgatagtttggcactt
ggaccccttctgaacctcttggtgcagctggctcgagatctacagacagacttttactgc
tattttcacgatttctttgacttgctgctaaacctacttagcaaaaatgctcaggaccct
gaacttctagaacagattttttcagctctgtcatacatattcaagttcctgtggcgttac
ctagtccgagacatcaaagatgtttatcagtatttttccactttattgagaaagaataac
agagagtatattgtcaactttgctgcagaaagctttgcctatctgatgagaaaggtgaaa
aatcatggagagttatttgattttctgttccttaccttggaagaatcacctgagactgct
gagggagtgggccgtttgttgtttgagatggtcaaaggcgtacagaaacagttccacagc
tgtacccagaagacattccctatagtgctgaaaaaactggaggagtgtcaagatggaaaa
tatgaacagctgccctgggaccatgtagaatcagcagtcactgaaatgtttgtagcaatg
gcaaaacacacagacaaaaagaactcatcagagatatggaaagtgttaatttctggagtt
gatgaggtacacaagtgctgggaaaaagctgctaagaaaaacaaagagaaaatctccacc
cacttgttacgacttttacgattaatgggcatgtggataaaccacaaaggaggaaagatt
atagcagagcctgaaactgtagcacagtgtttactgagcatgctaaggggagaccacctg
cccgaggctgtagggggacagttgctggaggatgtgtcctctctgttggtgacctgtacc
actgtcttacctgtggagaccacagtcaaactagtcaccagtgttttcaaaactaaatat
ccagaaagtctggtcttctcctttaccagagctgttcttgacttaccaatatttgagaag
gatgttttgccctccctgctgccctactgtcaccaggtgatgagtgggagggaccaggcc
tcacatgaactcaccattcatctactgacacatgtcactcaacagaaagccccgcctccc
actgatggcagtgagctggctcagctgcaggcatacatgatggatttcggagtaaccaaa
aagactggagttcccaaccacatcatgtctgctttgaagacagtgtcagcatcagacata
gtgaagggtgtcagtgatttacctgatgtgtggtcagcattggttctcttaccccatgtc
agaccaatactggacaagaaagaagccattcagtgtgttacttcactatttatgaatctt
ttaaaaagtgtatcagcagataccaatgagatctccaaaggtgaaattctccacatcatg
taccactgcctcctggccttgctttacatgcaggaggatggggagatgtttgaatggatt
cctcaggcagaagttgcttcccttttaagccattaccctgagaacatcacagtcctggaa
atggctgacctgtacttcacccaggccttactagatggcagcactagtgtcacctctgag
gagtcgctgctacaggtgtaccaatcgttagagaaaaacctgacctctcccttctccaag
gtccgtatgctgacattaaggatcctctcccagttctcattcaggctgccagctcaagag
gatggggatcccaacaggctggatgtattcaggatttgcctggaggcagagttagttccc
ttgaatgttcaggacttccggagaaagctgctctttttacaaaagctgcagtttgacatt
gttcagaaatccatccctgtggggccatttactctggttcccctgaggtatttgattgga
gctctccacataaatttcaaattactatgggaacccctgaccaaacttatcgccagccat
gctgctggtctggataagactgtgttctgggaactatacagacagaccctgcaagatgca
gcacacaaatgtgaggaggctatttaccaaacagaaaacaagcccaacccagaggaggag
gaggagtcaatggaggaagatgacagtttaagacagctttttgttgagagctatagatca
catgacacagctgagaaaccagatgaagttaactttaggttctatctgtggaagtccatg
cgtctgtttcctgagctgtgtgagaagaaaaacagagatgtggtgcctttgttctttgac
ttcataagcaaagaatactacaatgtagatctgtcagcggctcccacacagaacatactg
aaaaaagaaacacaggtgtcagctgaggctgaggaggaggaggaggttgaagaagaggaa
gatgaggaagaagaccatgtgttaaccagaaccgagagtaagaagaaggaggaggagaag
atagagaggaaaaggaaaaagtcagagtccaagtcagaattggaagaagatattgatgaa
ggccacaagaagggaggaaaacaaaagaaaggaaggttgcaggggaagatggtgaaacca
gggaagtcagatggctccagacttaaaagcagagctgcaactagtggtttgttggttcat
ctggagctgttcagtaaattcaccagtcccaagtccctgtacagagaagctgaactacga
cagctgtatgaacagctgctgctccacaagaatggcaaggtacagagagtggccttcagt
tgtatcatgacttataagcacagatacctagtaccatacagggagaattttgagaacttg
ctggatgatgccaagtttaagacagagattgtgttgttcagcattgaccatgagaacagc
atcatcagtacagaacacagggagcaggtgctgcccatactgatgaggatattgtatggg
aagatgcacagtaagacagggaaggactcagcgggaaaatccaacagtcagttccggaga
tccatcgtgttccgattcctgaacggctgcagcggagacgaaatcatcaagtttatggaa
atggtgtttgagaacttcaagcattttgtcacagatgatattttggctatggtatgcaaa
acagaaaaagaactggatctgtcaaaaatgattccactgagaaaaatgacaggggctttg
aatacagtggacatgattgtaaagaaactaggtcacctgatagagggttacctcccctcc
ctggagtgtatcctgttgggactgaccgcgacctgtgtggcctgtctggagaggagagag
gaggtgacccccggggccctcaaacccctcaagaacctccgacagctgtgtatagcccag
atacagcagttctatgacatctttgactcctacaagttctctcccaaggagatcgatgcc
atgttccatgtggctgtttggccacagttgtcaaagctgcagtttgaaggcatctaccat
cccacacccctcctaaagctcctgcatatgtgtgcaacaaacagaaggtattggacattg
ttggcaaaatgccatgattctgacatgaccttgaccccaataagtgcagtgttgagactc
cttaatgccaaggatgtcagcaagactgtgacagattttatcattgtcatgttagataac
ctgttgtctagagaggaggatgaggaaatggagagtatcaccacggcaacaccggtcaag
gtcaacaagatgatgcatatcagtgttttggaagtagaacaatttggagtggagctcctt
aaaccccatgtatcagacatactgacttatatacagagggcgatcaaaaacatcaaagga
caaggcaagaagtcacaggctgctggcaaagagttatctatcttgtctagaatcagcgag
tttgtgactgaccaatcagcttgcctgtcactgattgaactcctcctgccatttttgggg
gaagggcttagtcgaacaccggacacggagatcaacattctgaacagcatcaggaacctg
cttgagaaagtggaggacaaaaagaagttctacagacatattagcaagctgtttgggtac
atacagaatcgtcagtcaagaattcttatctgtcaactgattcaggtcattgccaatagt
aaccaggatttgaaggatatctctcaacttctaacagagatgaatgcttgggatcctaag
cacacggaggagccagactacattaagagactgaacgctcacaagaaagtcaacgaagcg
ataaaaaagatggaggaaaaactagatgtggacttcttgattcctgtgctccactcctgc
tgctactgcataaaaatggttgatgatatgtcgctaagagacaacgccacccacacactg
gttaccatggtgaagcagttcagtgttgtgacgtatgaccaggacgacttcagagaactt
atatcaaacggattggtccaggaggtcaaagcaggttttaagaacaaaaaagagactgtg
cgccatgagttcatcgcccttctttccgttctggtggacaccttcccatcacatgacatg
ttcgctgaccttgtggttctcaaggacaaagatgtggaggccgacttctttgaaaacatc
aggcacattcagacacacagacgctccagggcgttgaagaagatgaagcggatcctgtac
tcccggtcggtccgtaaggagatcctggtctcctacctcctccccctcacctcctccttc
ctcctggatgagacgtacaccaaggcccaggggctacaggagagtgccattgactccatg
gcgacgctctgtaaacagctgccatggcacgtttacatccaccagctcgactacttcctg
tccatgctgtccaagaagttcgagaagaagaaactcctggtcagggttattgttggaatt
ctggatgccttccactttgatttacgaaactcccagcatgcagttgtcaatctaccagac
gccattgccaagaagaaagccaaaggagaaataacagaagagccaaaccctcttgaagac
actgaaatggaatctacaaaagaggaggcaattccaatggttccagaggaggaggatgaa
actacggcgacgacccctgaccccttatccaagcagccagacagaatggtgatctgttct
gtgggccaggccaccagaattcactgtaccatcatgaaatctgtcatccctcatctacag
cgatccctaaccaaaaaagagaagagcgaggatgagcacaagttggtgaggaagaacatc
gctgaggacagcgaggtactgagggtccccatcgctctggccatgatcaagcttctccag
aacctcccacacaagtctctggagcacaacctgccagggatcctgttgaaggtgtgcaac
ttcctgaagtctcgagcggtggagatccggaacaccgcccgagacacactggtccagatc
accacctccctgggtcctcgcttcttccccttcatcctgtccgaactcaggggcaccctc
aggaagggataccaggtgcacgttctgtgctacacagtgtttgtgctgctgaagaatctg
ttgcccgtcctaaagccaggggatctgtctgtctgcaggaagagcttgcaagatgtattc
catgaggacttgtttggacaggtcgcagaagagaaggaggtggccggggtgaccaccaaa
ctgtttgaggcgcggtcctccaagagctacgactcgtacagaatcctggcccaagtcatc
agcagagattccctcatggcattcattactccattgaaagaggtgctggtttctacacac
agtcacaccattgccaggaaagtccaggaagttctcaagaaggtggtaactggcttgctg
gacaaccccgggctggacacagagtccctgatgatatttacccacggtctgatcacacag
tccttcccgcagctctccgaaaatcagagcaagaaaaacaagggtgaggacaaagacact
cagactttccggccccagagctgtctactgttaccccatgaaccgaagcgaggtggagac
aaacccaagctgagcaagaagaccaacatccacgtactggtggagtttggtctccagctg
atgagtctgtgtctgaggaggggccgcctggtggcaaccgaagaggagcaccgcaaactg
gtggaccccttcatcaccatcctagccgactgtctgtttgccaagcacatcaggataaac
acactgagtctgcgatgcctgtgctggctactgaagtttgacctgccctctgtcaacagc
cacatcaccaagctggctaatggcatgttcatcctgctcaaaaactacgcctcagctggg
gcctccaagggggagaacctggagctcatttctatggcattcaaggcagtgacagtgctg
gtccgggatgtgaagatctacaaactggagcagacacaattacaggttctgctgaccttc
tgtgaagaggacttgtacgactacaacagacagagcactgcattctccctgctaaaggcc
attctgtctcggaagttgaacgttcccgaggtgttggagctgatcaggaaggtggaggac
atgtcaatcaccgccgactccccccacgtcaggagagagtgcagacagatagctctgcag
tacattctagaataccccttgggaaagctgctgaataaacacttggagtactacgtcaca
cagctgtcgtatgaaatggagatgggcagggaatcagccttagaaatgttggctaccata
ttttcctcttttcctcagaacattttgaatgaccatgcagggatgttctttatccctatg
tcagctgccctagtcaatgatgagtcaactaaatgtagaaaactgactgcattggccatc
aagtctcttttacaaaagattgaccataactcgagggttgaacttttcaacattacacag
aaatggtttactgatgacaagataaaccatcgcatccttgctgctcagttgactggtcta
tttatagaagtggagtcagccaagttctcacaccatttatctgtgatattacccataatt
caacagcaaatagacccaggcagatattcagataattctgggggttctgagggggagaca
gagaaggacaggctcctgttcaactgtctgaacacgctgctcaagttactgagggagtgt
gacctcatcagggacgcaaagtggactgatgacatgaaccttatctgggagagtatcatc
agtcacttgggatatgaacatatgtgggtacagttggcatcatgccagctgataggtctg
ctatttgctgcatggactccagaggaaatcctacagccagtagaaaaatctggtcagacg
gacttcattaaaacagattccatcaataagcttgaaagtttggcattggaccttataaca
cagttgcaatccaaatatctgacagatgaactggccaatcaaatcatcaaaaacatggtg
ttcattgccaaggtagccaagctcctcagtgacatagagagttcaagtgactctgtggag
cagaaaggacagaggggttccaagggcaaaaaatgtttgtcgttaagatggctggtcaag
aaaatggtccgagaagcaaatcatgaagctgtcaaccaacccaaaactaccatcaagagg
tccagtgtgtttaagtggatcgcggccctcagtatggacctaggccccacactactgccc
tctgttgttcctatagtgatgcccgccttacaaagggagacaaatgagaataacccaaac
acagattcagctcttaagagtctggctcaagaggtcttagacatcatgaggaagattcta
ggcgttgaaacatacactcagctgttcgccaaaacccacaaagagcagtacgaccggaag
gaaagcaggaaaagaaaggatgctgtggaggctgtttcaaatcctcaatatgctgccaaa
aagaaaatgaagaaaaatttggccaaaagggaagccaaaaagagaaagctagaggagttc
cgagtgtcaaagaaaattaagaaacgcaaagtgaaagacatggcttttacgtcttga
DBGET
integrated database retrieval system
