Magallana angulata (Portugese oyster): 128184346
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Entry
128184346 CDS
T09348
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03082
ATP-dependent chromatin remodeling
canu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128184346
03083 Polycomb repressive complex
128184346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
canu03036
]
128184346
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
128184346
Histone modification proteins
HAT complexes
HATB complex
128184346
HDAC complexes
Sin3A-HDAC complex
128184346
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
128184346
PRC2.2
128184346
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
128184346
Heterochromatin formation proteins
Other heterochromatin formation proteins
128184346
Chromatin remodeling factors
NuRD complex
128184346
NuRF complex
128184346
NuRF complex (fruit fly)
128184346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
MIOS_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
128184346
NCBI-ProteinID:
XP_052709747
LinkDB
All DBs
Position
5:55711941..55726913
Genome browser
AA seq
426 aa
AA seq
DB search
MTDKDEGFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSLHRLILGTHTTDEMNNLLIASIQLPNDNSTFDASMYESERGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPELRLKGHQKEG
YGLSWNPNLNGHLLSASDDHTICLWDINQNPKEHRVIEAHTIFTGHTSVVEDVAWHLLHE
SLFGSVADDQKLMIWDTRSNNTTKASHIVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAAE
LETGTS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaagacgagggttttgatgatgcggtggaggagagagttattaatgaagaa
tataagatttggaaaaagaacacaccgtttctctatgacttggttatgacccatgcatta
gaatggccaagtttgacagcccagtggctcccagatgtcacaagaccagaaggcaaagac
tattccctacacagacttattttaggaacacacacgactgatgaaatgaacaatttgctg
atagccagtattcagcttcccaatgataactcaacatttgatgcctccatgtatgaatca
gaaaggggagagtttggcggatttgggtctgttagtggtaaaatcgagatcgagataaag
ataaaccatgagggagaagtgaacagggccaggtacatgcctcagaatccatgtatcatc
gccacgaagacaccgtccagcgatgtcctggtgtttgactacacaaaacacccctccaaa
ccagaccccagtggtgaatgcaatccagaactacggctgaagggacatcaaaaagaagga
tatggcttatcatggaatcccaacttgaatggacatctactcagtgcttcagacgatcat
acaatttgcctgtgggacatcaatcagaatcccaaagaacaccgagtgatagaggcccac
accatcttcaccggtcatacctcagtcgtggaagatgtggcctggcatttactccatgag
agcttgtttggatcagtggcagatgatcagaagttaatgatatgggatacaaggtcaaat
aacacaaccaaggccagtcacattgtggatgcccacaccgcagaggtcaactgtctgtcc
ttcaacccctacagcgagttcatcctggccacagggtcagctgacaagactgttgctttg
tgggatcttcgaaatctcaaactcaaacttcattcattcgaatcacacaaagatgaaatt
ttccaggttcaatggtctccacataatgagacaatcctggcttcgagtgggacagacaga
cggctccatgtatgggatctcagcaaaattggcgaggagcagtctgcagaggatgcagaa
gatggacccccggaactgttgttcattcacggagggcacacagctaagatttcagacttt
tcttggaaccccaatgaaccttgggtaatctgctctgtgtctgaagacaacataatgcaa
gtctggcagatggctgaaaatatttacaatgatgaggaacctgacacgccagctgcagaa
ttggaaactggtacttcataa
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