KEGG   Magallana angulata (Portugese oyster): 128184346
Entry
128184346         CDS       T09348                                 
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
canu  Magallana angulata (Portugese oyster)
Pathway
canu03082  ATP-dependent chromatin remodeling
canu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:canu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    128184346
   03083 Polycomb repressive complex
    128184346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:canu03036]
    128184346
Chromosome and associated proteins [BR:canu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     128184346
  Histone modification proteins
   HAT complexes
    HATB complex
     128184346
   HDAC complexes
    Sin3A-HDAC complex
     128184346
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     128184346
    PRC2.2
     128184346
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     128184346
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    128184346
  Chromatin remodeling factors
   NuRD complex
    128184346
   NuRF complex
    128184346
   NuRF complex (fruit fly)
    128184346
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_RIG_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_SPT8 NBCH_WD40 MIOS_WD40 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 128184346
NCBI-ProteinID: XP_052709747
LinkDB
Position
5:55711941..55726913
AA seq 426 aa
MTDKDEGFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSLHRLILGTHTTDEMNNLLIASIQLPNDNSTFDASMYESERGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPELRLKGHQKEG
YGLSWNPNLNGHLLSASDDHTICLWDINQNPKEHRVIEAHTIFTGHTSVVEDVAWHLLHE
SLFGSVADDQKLMIWDTRSNNTTKASHIVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAAE
LETGTS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgacagataaagacgagggttttgatgatgcggtggaggagagagttattaatgaagaa
tataagatttggaaaaagaacacaccgtttctctatgacttggttatgacccatgcatta
gaatggccaagtttgacagcccagtggctcccagatgtcacaagaccagaaggcaaagac
tattccctacacagacttattttaggaacacacacgactgatgaaatgaacaatttgctg
atagccagtattcagcttcccaatgataactcaacatttgatgcctccatgtatgaatca
gaaaggggagagtttggcggatttgggtctgttagtggtaaaatcgagatcgagataaag
ataaaccatgagggagaagtgaacagggccaggtacatgcctcagaatccatgtatcatc
gccacgaagacaccgtccagcgatgtcctggtgtttgactacacaaaacacccctccaaa
ccagaccccagtggtgaatgcaatccagaactacggctgaagggacatcaaaaagaagga
tatggcttatcatggaatcccaacttgaatggacatctactcagtgcttcagacgatcat
acaatttgcctgtgggacatcaatcagaatcccaaagaacaccgagtgatagaggcccac
accatcttcaccggtcatacctcagtcgtggaagatgtggcctggcatttactccatgag
agcttgtttggatcagtggcagatgatcagaagttaatgatatgggatacaaggtcaaat
aacacaaccaaggccagtcacattgtggatgcccacaccgcagaggtcaactgtctgtcc
ttcaacccctacagcgagttcatcctggccacagggtcagctgacaagactgttgctttg
tgggatcttcgaaatctcaaactcaaacttcattcattcgaatcacacaaagatgaaatt
ttccaggttcaatggtctccacataatgagacaatcctggcttcgagtgggacagacaga
cggctccatgtatgggatctcagcaaaattggcgaggagcagtctgcagaggatgcagaa
gatggacccccggaactgttgttcattcacggagggcacacagctaagatttcagacttt
tcttggaaccccaatgaaccttgggtaatctgctctgtgtctgaagacaacataatgcaa
gtctggcagatggctgaaaatatttacaatgatgaggaacctgacacgccagctgcagaa
ttggaaactggtacttcataa

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