Magallana angulata (Portugese oyster): 128184526
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Entry
128184526 CDS
T09348
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
canu03037
]
128184526
Cilium and associated proteins [BR:
canu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
128184526
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_6
TPR_8
TPR_19
TPR_16
TPR_14
TPR_7
TPR_11
ANAPC3
TPR_9
ARM_TT21_5th
TPR_10
ARM_TT21_N
ARM_TT21_4th
TPR_CcmH_CycH
TPR_17
DUF2225
TPR_21
ARM_TT21_C
TPR_MalT
HAT_PRP39_C
ARM_TT21_2nd
HEAT_Nup120
TPR-S
TPR_15
RNPP_C
TPR_4
RPN7
Motif
Other DBs
NCBI-GeneID:
128184526
NCBI-ProteinID:
XP_052710011
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All DBs
Position
5:57722407..57735025
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AA seq
823 aa
AA seq
DB search
MNRMNMMEQVHLAGEDEDDIYGGFNDYNATLDVDDLQHDSTFQKAVLRTSHGRRPPPTAA
RGLGGVPGTAARGGRMGMPSSMGRIGTAAGGGGQDMARPMTAVRGAGYTSAGNRAAGFDP
MNQAGPAPPLEPKPEESPEEKIRQLEKKVNELIEESCFANSTGDLSLALEKAKEAGRKER
VLVRQREQQSMGDQINLDLTYSVLFNLANQYAANEMFNEALNTYQVIVKNKMFTNAGRLK
VNMGNIYFRQRNYPKAIKFYRMALDQVPNSHKEMRTKIMQNVGIVFVKMGQYNDAITSFE
HIMQEAPNFKTGFNLILCYFALGDREKMKRGFQKLLTVDLRIDDEDKYLPHGEDKNYNLI
LEVIKNDALRQIERKRKYDAENCIKTAAKIISPAIEVQFSVGYDWCTEQVKSSQYLDLAH
DLEIDKAIMFLKQKDFTQAIETLKSFEKKDTKVASTAATNLSFLYFLENDLEQADKYAEL
AMSADRYNPAALVNKGNVLYARGDYEKAREFFKEALQNDSSCVEGLYNLGLTNKKISRLE
DALDCFYKLHAILRNSPQVMYQIADLHDQLEDTAQATEWFMQLIGVAPTDTSVLARTGEI
YDNEGDKSQAFQYYYDSYRYFPSNIPVIEWLGAYYIDSQFCEKAIHYFERAAIVQPAQVK
WQLMIASCYRRSGNYQQALETYKKIHKRFPDNIECLRYLMRICSDLGLPEAQEYATKLKK
AEKTKELREQRATSGTRRGSGRGRRGEEEREGSGGGRRGKSKGRRPHLDDIGDEPYQARQ
QEVDASYSDPLGPQMERPKTAAARKQDNDDLFDEDVGDDLLPE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaatgaacatgatggaacaagttcatttggcaggtgaagatgaagatgacatt
tatggaggattcaatgattataacgccacacttgatgttgatgatttacaacatgactcg
accttccagaaagccgtcctgagaaccagccatggtaggagacctcctcctactgccgcc
agaggactaggaggagttcctggaacagctgcaagagggggtagaatggggatgccctcc
tccatgggtcgcataggaacggctgctggagggggaggtcaggacatggctcgaccaatg
acagcagtgagaggggctggctacacatccgcaggaaacagagcagctggttttgatccc
atgaatcaggcaggacctgcccctcccctagagcctaaaccagaggagagcccagaagag
aagatccgtcaactagagaagaaggttaatgagctgatagaagagagctgctttgccaac
agtactggagacctcagcctggcccttgaaaaagcgaaggaagcagggaggaaggaaaga
gttctagtcagacagagggagcagcaatccatgggtgaccagatcaaccttgacctcaca
tactccgtgttgtttaatttggccaatcaatatgcagctaatgagatgtttaatgaagcc
ctgaacacctaccaagtgattgtcaaaaacaaaatgttcacaaatgcaggtcgtttaaaa
gtgaacatggggaacatttacttcagacaaaggaattacccaaaggccatcaagttctac
agaatggctctggatcaggtccccaattcccacaaagaaatgaggacaaagatcatgcag
aatgttggcattgtgtttgtgaagatggggcagtacaatgatgccatcacgtccttcgaa
cacatcatgcaggaggctcccaacttcaagaccggcttcaatctgatcctctgttacttc
gctctcggagatcgagagaagatgaagcgagggtttcagaaactcctgaccgtggatctc
agaattgacgatgaggacaaatacctcccacatggggaggacaagaactataacttgatc
cttgaggtcatcaaaaatgacgcactcaggcagatagagaggaagaggaagtatgatgct
gagaactgcataaagacagcagccaagattatctcccctgccatagaagtgcaattctct
gtaggatacgactggtgtacagaacaggtgaagtcctcacaataccttgacttggcccat
gacctggaaattgacaaggctatcatgttcctgaaacagaaggatttcacccaggccata
gagaccctcaaatcttttgagaagaaggacacaaaagtggccagcactgctgccactaat
ctctccttcctttacttcctggagaatgacttggagcaggcagacaagtacgcagagctc
gcaatgagtgctgatagatacaaccccgcagcactggtaaacaaaggcaatgtgttgtat
gcccggggcgactatgagaaggctagggaattcttcaaagaggcacttcagaatgattcc
tcatgtgtggaaggattgtacaacctaggtttaactaacaagaagatcagccggttagag
gacgccttggattgtttctacaaactccacgccattctacggaacagtccacaagtcatg
taccagatagcagacctacacgatcagctggaggacaccgcccaggcaacagagtggttc
atgcagctgatcggggtggctcccaccgacacctctgtgctggccaggactggggaaatc
tacgacaacgagggcgacaaatcccaggcgttccagtactattatgattcctaccggtac
ttcccctccaatattccagtcatcgagtggctaggagcgtattacatagactcccagttc
tgtgagaaagccattcactactttgagagggcagccattgttcagccagctcaggtgaag
tggcagttgatgatagctagctgttatagaaggagtgggaactatcagcaagctctagag
acctacaaaaagatacacaagagattccctgataatatagaatgtttacgttacttaatg
aggatctgttcagaccttggtttacctgaagctcaagagtatgccaccaaattaaagaaa
gctgagaaaaccaaggagcttagggaacagagggcaacaagtggaacacggagaggaagt
gggcgtggccggaggggagaggaagaacgagaaggcagtggtggtggaaggagagggaag
tcgaaggggcgacgcccacatcttgatgacatcggagatgaaccgtaccaggctcggcaa
caggaagtcgatgcttcatactcagatcccctgggcccccaaatggagcgacctaaaacc
gccgcagccagaaaacaggataatgacgatttgtttgatgaagacgttggggacgaccta
ttgccagaatga
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