Magallana angulata (Portugese oyster): 128185383
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Entry
128185383 CDS
T09348
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128185383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128185383
03400 DNA repair and recombination proteins [BR:
canu03400
]
128185383
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128185383
Messenger RNA biogenesis [BR:
canu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
128185383
DNA repair and recombination proteins [BR:
canu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
128185383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Sec7
AAA_34
Motif
Other DBs
NCBI-GeneID:
128185383
NCBI-ProteinID:
XP_052710949
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All DBs
Position
5:36232465..36292439
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AA seq
474 aa
AA seq
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MFDHRYDCCDTCKKSLSSFSIDSLKPEQRQILDILVERKDCLVILPTGFGKSLPFHVFLP
VIREIRADFNQSVMLVCCPLVALMQDQVAKLATIKSVSAAYIGSSVESDARILNGEIDII
YASPERVINDAGWREGITKLKVCSIVIDEFHTIATWGEDISGLNKQAFRKWFASVGELRS
LFPQANVVALSATCTQKIKKRVMKQLCFGPNTVEIFKSPNKANIKLSVCKVSNELEIAMS
WLVDGLKQLAGDFPKTLLYCYSINDVSKLYSYFSKELDEETFGSLIDMFHSETPPSKKEE
IVKFLGDKTNSSKKRLVICTNALGMGIDVSNCCSVILFGMPDNIVDLVQEIGRIGRNGEQ
SIAMILFNSYHLRRLNKDMKEILCSSDCRRLNIMRHFLMDSDLKELEKDTGVHTCCDICQ
KGCKCDNCELLLLERLLENEVLTDTDSTCSDNSENTEDCWESTFASELNFNLEI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcacaggtatgattgttgtgatacctgcaagaaatcgttgtcaagttttagt
attgactctttaaagccggaacagagacaaatattggatatattagtcgaaaggaaagac
tgtttagttatattgccaacaggatttggaaaatcgcttccttttcacgtattcttgccg
gttattcgcgagataagagcagattttaaccaaagtgtcatgttagtgtgctgtccttta
gttgcattgatgcaggaccaggtggcgaagttagcaacaataaaaagtgtttcggcagca
tacataggatcaagtgtagaaagcgatgcccgtatcctgaatggggaaatagatatcata
tatgcatccccagaacgagttataaatgatgctgggtggagagagggcataacaaagttg
aaagtttgttccatcgttatagacgagttccacaccattgcaacatggggtgaagacata
agtggactaaataaacaagctttcagaaagtggtttgcttctgttggagaactgcgttct
ttatttccacaagccaatgttgtggcattgagtgcaacctgcacacaaaaaattaagaaa
cgagtaatgaagcagttgtgttttggaccaaacactgtggaaattttcaagtctccaaac
aaagccaacattaaactttcagtgtgtaaagtttcaaatgaactggaaattgcaatgtca
tggcttgtagatggtttgaaacaattggctggtgattttccaaaaaccctgttgtattgt
tacagtattaatgatgtgtcaaaactttactcttatttttctaaagagctggatgaggag
acatttgggtccttaattgatatgtttcattcagaaactcccccatccaaaaaggaagaa
atagttaagtttttgggagataaaacaaacagtagtaaaaaaagattagttatatgtaca
aatgcattgggaatgggtattgatgtgtcaaattgttgttctgttattttgtttggaatg
cctgacaatatcgtagatttagttcaagaaataggtagaataggaagaaatggtgaacag
tcaatagcaatgatactgtttaattcctatcatctccggcgtttaaataaagatatgaaa
gagattctttgttcaagtgactgcagaagattgaatattatgaggcattttttgatggac
tcggatttaaaagaactagaaaaagacacaggagtacatacttgttgtgatatttgccaa
aaaggttgtaaatgtgacaattgtgaactacttcttttagagagacttttagagaatgaa
gttctaactgacacggacagtacttgtagtgataattcagaaaatacagaggactgttgg
gaaagtacatttgcctcagaattgaactttaaccttgaaatctga
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