Magallana angulata (Portugese oyster): 128185561
Help
Entry
128185561 CDS
T09348
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128185561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128185561
03041 Spliceosome [BR:
canu03041
]
128185561
03032 DNA replication proteins [BR:
canu03032
]
128185561
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
128185561
Spliceosome [BR:
canu03041
]
Complex A
U1 snRNP components
Sm proteins
128185561
U2 snRNP components
128185561
Complex B
U1 snRNP components
128185561
U4/U6.U5 tri-snRNP components
128185561
Complex C
U2 snRNP components
128185561
DNA replication proteins [BR:
canu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
128185561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
128185561
NCBI-ProteinID:
XP_052711089
LinkDB
All DBs
Position
5:25072351..25076301
Genome browser
AA seq
90 aa
AA seq
DB search
MAYKGGQKVQKVMVQPINLIFRYLQNRSRISVWLYEQTNLRIEGCIVGFDEYMNLVLDEA
EEVHMKTKNRKTLGRILLKGDNITLIQQVQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaaaggtggacagaaggtgcagaaggttatggtgcagcctattaatctgatt
ttcagatacttgcagaatagatctagaatatccgtttggttatatgagcagacaaacctg
aggatagagggatgtatagtgggttttgatgaatacatgaatcttgttttggatgaggca
gaagaggttcacatgaaaacaaaaaacaggaagacattaggacgaattcttctaaaggga
gacaacataacattaattcaacaagtgcagtga
DBGET
integrated database retrieval system
