Magallana angulata (Portugese oyster): 128185575
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Entry
128185575 CDS
T09348
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
canu03400
]
128185575
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128185575
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
128185575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
nSTAND3
YxiG
Motif
Other DBs
NCBI-GeneID:
128185575
NCBI-ProteinID:
XP_052711115
LinkDB
All DBs
Position
5:56363749..56457639
Genome browser
AA seq
2200 aa
AA seq
DB search
MSSLPRLSVALRAFANVSSNKEKSASDLQRELINKRQLLAKQHTDTVSWKRLKEIITKEA
DVPQQEVDGALRELTQYVKAIVGSEASFETVESSAAFIFDLLKSVSIVGKKETTRLRQVF
GPFPASAASNACSLINKIGSWLPENTLDSLGNQDRQEADGEASVTEFGKNIKFQGLRRGQ
TLEEDVLSSDSDDEDRRELDLKYIASPKKPIAPKKESPNKDSFDSSWLQREVTQYFPGEE
TYLGMSKEDLCSTIFDVLTASNSDEQLQNDLFEFLGFDRFELIQSLIQNKQKIIEGALTQ
PEANKQTRAKADGGNRPPVTRPNYGCQVTVQTENERQMMKIMRREEKKEKRKNEEGEEDV
GFLFDPVYLRAQREAALRAPQPMFSGGRGNYAPREKYPFVFDSMEEARQSSAFIGGVKMV
LPDSFSRKSTKLAEEVRIPHTEAQATNVGNQRIKIEDLDEIAQLAFKNTKALNRIQSVVF
DAAYKTNENLLICAPTGAGKTNIAMLTILHEMKQHISQGVIKKDEFKIVYVAPMKALAAE
MVRNFGGRLEPLGISVKELTGDMKLSKSEIIKTQMLVTTPEKWDVVTRKSTGDVALTQLV
KLLIIDEVHLLHDDRGSVIESLVARTIRQVESSQSMIRILGLSATLPNYIDVARFLHVNP
YVGLYFFDGRFRPVPLGQTFVGIKATSKVQFLQDMNTVCYDKVLEQVRQGYQVMVFVHAR
NDTVRTAMVLRDLAKNNGEMGFFAPEQSAQYGQAEKSTLKSRNKQLKELFPDGFGIHHAG
MLRQDRNLVERYFAAGHIKCLVCTATLAWGVNLPAHAVIIKGTEIYDSKKGAFVDLGILD
VMQIFGRAGRPQFDKFGHGTIITAHEKLSHYLSLMTRQNPIESQYINSLTDNLNAEIALG
TVTNIEEAVKWLSYTYLYVRMRCNPLAYGINYNTLETDPMLEQHRRDLIVDAGRKLDKAQ
MVRFDERTGYFASTDLGRIASHFYIKYDTVEVINEHLKQIMTEADVFAVVSKAQEFDQIK
VRDDELEELDGIHHDICVMQVPGGSENTYGKVNILLQAYISRHYMDAFSLVSDQAYVAQN
AGRIIRALFEVALKKGWPVMAGRLLNLCKTIDKRLWGFENPLRQFPLLTNEILNKLEAKK
MTVDRLKEMDPKEIGHMVHHPRMGGVIKRCVNQIPLLDLEASIQPITRTVLRVRLNIQPE
FKWDDKVHGATAESFWIWVEDPDNNHIYHSEYFLLHKKQVLSGEAQQLVFTIPIFEPLPS
QYYVRAVSDRWLGSQSSCAISFQHLILPERHPPHTELLDLTPLPKSAYDDPALEALYKFS
HFNPIQTQIFHVLYHTDTNVLLGAPTGSGKTVAAEMAIFRVFREYPKAKAVYIAPLKALV
RERMEDWKVRIEQKLGKKVVELTGDVTPDMRAVANADLIVTTPEKWDGVSRSWQTRSYVK
AVALLVIDEIHLLGDDRGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDLADWLGI
KQMGLYNFRPSVRPVPLEVHIHGFPGQHYCPRMATMNKPTFQSIKTHSPEKPVLVFVSSR
RQTRLTALDLIAFLAAEDNPKQWLHMEEMEMENIISGIKDTNLKLTLAFGIGLHHAGLIE
RDRKVCEELFVNQKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKTRRYVDFPITDVLQ
MMGRAGRPQFDDQGVAMILVHDIKKHFYKRFLYEPFPVESNLLEVLPDHMNAEIVAGTVT
SKQDAMDYITWTYFFRRLVQNPTYYNLDSTDFDSINKFLSSLVEKALYELECSYCIEVDD
DQRGVHPMTLGRISSYYYLNHKTMRMFRDELKSECTMPELIEVLSNAEEYAQLPVRHNED
QINSQLAQKVPLEVNPHTYDSSHTKTHILLQCHFGQLPLPSTDYNTDTKSVLDQAIRILQ
AMLDVSADEGWLVTSLRITQLIQMVIQGRWYHDNALLTLPHMTPFHISCLNSRPGGEGAK
RKGFPNIQGPIQTLPEFLAVCDGKFDAVLAMLGEDMTRNQLDQLYQVMGTLPQVEVNMEV
KGWWEGGEGQQEARKVSKAHTGGRRPDSDWIQVHADQEYVIEVTLKRLNKFKKRDSKAHA
PRFPKPKDEGWFLIIGDIENREVVALKRVGYLRGASRQSLAIYTPETLGRVIYTLYLMSD
AYLGLDQQYDICLDIIPASIETQVNTEISNELNDLDFSDS
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atgagttctctgcctcgactttccgtagctctaagagcatttgccaatgtgagttctaat
aaagaaaaatctgcgtcggatctgcagcgcgagcttataaataagcgacaattacttgcc
aagcaacacacagatactgtgagttggaaacgtctgaaggaaataatcacaaaggaggct
gatgtacctcaacaggaagtggacggagctctcagagaactgacacaatacgtcaaagct
atagtgggatcagaagccagctttgagactgtagagagctctgcagcctttatatttgat
cttctgaagtcggtcagtatcgtggggaagaaagaaaccacaagactgcgacaggtcttt
ggacctttccctgcctctgcagccagcaatgcctgctctttgatcaacaagatagggtca
tggttaccagaaaataccctggattccctgggtaaccaggacagacaggaagcggacggg
gaggcaagcgtgacagagttcgggaagaacatcaagttccaggggctgaggcggggtcag
accctcgaggaagatgtgctcagttcagactccgatgatgaggacagaagagaacttgac
ctcaagtacatagcatcccccaaaaaacccatcgcacccaagaaagagtccccaaacaaa
gacagttttgactcttcatggctacaaagggaggtcacccaatacttccctggggaggag
acatatctaggaatgagtaaagaggacctgtgctccaccatttttgatgtcctgacagcc
tccaactccgacgaacagctgcaaaatgatctatttgagttcctaggttttgacagattt
gaactgattcagagtttgattcagaacaagcagaaaataattgagggggccttaactcaa
ccagaggcaaataaacaaacaagagccaaagctgatggaggaaaccgcccgcccgtgacc
agaccaaactatggctgtcaggttactgtacagacggagaatgagcgtcagatgatgaag
ataatgaggagggaggagaaaaaagagaagaggaagaatgaagaaggtgaagaagacgtg
ggcttcctgtttgatcctgtttatctcagggctcagagagaggcagctcttagagcccca
cagccaatgttcagcggagggcgaggaaactatgccccgcgggagaagtatccttttgtg
tttgattcgatggaagaggcacggcagtcctctgccttcataggaggagtcaagatggtt
ttgccggacagtttctccaggaagtccaccaagctggcggaggaggtccgtattccccac
actgaggcccaggccacaaacgtaggcaaccagaggataaagattgaagacctggatgag
atcgctcagctggccttcaaaaacaccaaagctctgaaccgtattcagtctgttgtgttc
gacgcagcgtataaaacaaatgagaatttgttgatctgtgccccgactggagcaggaaag
acaaacattgccatgttaaccatcctccatgagatgaagcagcatatctcccagggtgtc
atcaaaaaggacgagttcaagatagtgtatgtggcaccgatgaaagctctggccgctgag
atggtgcgtaactttgggggacgactggagcctcttgggatatctgttaaagaactcact
ggagatatgaagctgtcaaagtctgaaatcatcaagacacagatgttggtgacaacacct
gagaagtgggatgttgtgacccggaagagtacaggggacgtcgccttgacccagctggtc
aagttactaattatagacgaggtccaccttctccatgatgaccgaggctcggtgatagag
agtctggtcgctaggaccatcagacaggtggagagctcccagagcatgatccgtatcctg
ggcttgtccgccaccctccccaactacatcgacgtggcccgattcctccacgttaacccc
tatgtcgggctctacttctttgatgggcgcttcagacctgtgcccctaggacaaacattt
gtaggaataaaggcaacgagtaaggtgcagtttttacaggacatgaacactgtgtgttat
gataaagtcttggagcaagtcagacagggctaccaggtgatggtgttcgttcacgcgcga
aacgatacagtcagaacggccatggtgcttcgagatttagccaaaaataacggggagatg
ggattttttgccccggaacagtctgctcagtatggacaggcggaaaaatcaacgttgaaa
tctcgaaacaaacagctgaaggagctgtttccggacggatttggaatccatcacgcgggc
atgctccgacaggacaggaacttggtggagaggtactttgctgcgggacacattaagtgt
ctggtgtgtacggcgaccctggcctggggagttaacttacccgcccatgcagtcatcatc
aagggaacagaaatatatgactctaagaagggagcctttgtggacctgggtattctagat
gtgatgcagatctttggtcgcgctgggagacctcagtttgacaagtttggacacggaaca
attatcactgcccatgagaagctctcccactacctctctctgatgacacgacagaaccct
atagagagtcagtacattaatagtctgactgacaacctcaatgctgagatagcactgggg
acagtgaccaacattgaggaggcggtcaagtggctgagttacacctacctctacgtcaga
atgaggtgtaatcctctagcttacggcatcaactacaacacactggagactgaccctatg
ctggagcagcatcggcgagatcttatcgtggacgctgggagaaaactggacaaggcacag
atggtgcggttcgatgagagaacaggatatttcgcctccacagatctcggccgcattgct
agtcacttctacatcaagtatgacacagtggaggtgataaatgaacatctgaagcagatc
atgacagaagctgatgtgtttgctgtggtgtccaaggcacaagagtttgaccaaattaag
gtgcgagatgatgagctggaggaactagacggcatccaccacgacatctgtgtgatgcag
gtccccggggggtcagaaaacacgtatgggaaggtcaacatcctgctacaggcctacatc
tcacgtcactacatggacgccttctcactggtgtcagaccaagcctacgttgcccagaat
gctggtcgtatcatacgcgccctgtttgaagtagctctaaagaagggctggcctgtgatg
gcggggcgtctcctcaacttgtgtaagaccatagacaagcgattatggggctttgagaat
cccctgcgacagtttcccctcctgaccaatgagatcctcaacaagctggaggccaagaag
atgaccgtcgacaggctgaaggagatggaccccaaggagataggtcacatggttcatcat
cccagaatggggggagttataaagcgatgtgtgaaccaaattcctctactagatctggag
gccagtatccagccaatcacacggaccgtactgagagtgcggctcaacatccaaccagaa
ttcaagtgggacgacaaggtacacggagctacagctgagtcgttctggatctgggtggag
gatccggacaacaatcacatctaccactcggagtacttccttctacacaagaaacaggtg
ttgagtggggaggcccagcagcttgtgttcactattcctatatttgagcccctcccctcc
cagtactatgtgagggcggtgtctgaccgatggcttggctcccagagttcctgtgcaata
tcattccaacatctcatcttaccagaaagacatccccctcatacagagttacttgacctg
acccccctccctaagtcggcttatgatgaccccgccctggaggccctgtacaagttctcc
cactttaaccccatacagacccagatcttccacgtcctatatcacacagacaccaacgta
ctgctgggggctcccacagggtctgggaaaacggtcgcagctgagatggctatatttaga
gtgttcagggaataccccaaagcaaaggctgtgtatatagctccattgaaagccttggta
agagaaagaatggaggattggaaagtcaggattgagcaaaaactgggaaaaaaagttgtt
gagttgacaggagacgtcacccctgacatgagagctgtggccaatgctgacctgatagtg
accacgcccgagaagtgggacggggtcagtagaagctggcagaccaggagctatgtcaag
gctgtggccctgctggtcattgatgagatccatttactgggggatgaccgaggacccgtg
ttggaggtgatcgtttcccgtacaaacttcatctcctcccacacagagaagcccgtccgt
gtggtggggctgtccaccgccctggcgaacgcccgcgacctggctgactggcttggaatc
aaacagatggggctgtacaacttccgtccgtctgtccgccccgttcccctagaggtccac
atccacggattccccggacaacattactgcccgcgtatggccaccatgaataagccaacc
tttcagtccataaaaacccactccccagagaagcctgtgctggtgtttgtgtcgtcaagg
agacagacacgcctgactgcccttgacctgattgcgttcttggccgcagaggataacccc
aaacaatggctacacatggaggagatggagatggagaacatcatatcaggaatcaaggac
accaaccttaagttgaccttggcctttgggatcggtctccatcacgccggactaatagag
cgagacaggaaagtgtgtgaggaactgtttgtcaatcagaaaatacaggttctaatagcg
accagcaccctagcctggggggtcaacttcccagcccatctagttgtcgtcaagggaaca
gaatactttgacggaaaaactcgacgctatgtagattttccaatcacagatgtgctacaa
atgatggggcgggccgggcgtccccagtttgatgaccagggtgtggccatgattctggtc
cacgacatcaagaaacacttctacaaacgattcctgtacgaacctttccctgtggagtcc
aatctgttggaggtactacccgaccacatgaatgcagagatcgtggcagggaccgtcacc
tctaaacaggacgccatggactacatcacatggacctatttcttccgccgccttgtccaa
aaccccacgtactacaatttagatagcacagactttgactccatcaacaagttcctgtcc
tctttagttgaaaaggccttatatgaacttgaatgttcctactgtattgaggtggatgat
gatcagcgaggtgtgcacccaatgaccctggggaggatctcctcttactactacctcaat
cacaagaccatgaggatgttccgggacgaactcaagtccgagtgtaccatgccagagctg
atcgaggtcctctctaatgcagaggagtatgcacagttacctgtccgacacaatgaggac
cagattaacagtcagctggcccagaaggtgcccctggaggtgaacccccacacctacgac
tcctcccacaccaagacccacatcctgctacagtgccactttggtcagctgcccctcccc
tccaccgactacaacacggacaccaagtctgtgctggatcaggccatcagaatcctgcag
gccatgctggatgtgagtgcagacgagggctggctagtcacctccctacgaatcactcag
ctcatacaaatggtcatccagggacgctggtaccatgacaacgccctcctgaccctgcct
catatgacaccatttcacatcagctgtctaaacagtaggccaggtggagaaggtgctaag
cggaaaggatttcccaacattcagggtcccattcagactctcccagaattcctagcagtg
tgcgatggtaaatttgatgctgtcttggcgatgctaggggaggacatgacaaggaatcag
ctggatcagctttaccaggtcatgggcactctccctcaggtcgaggtcaacatggaggtc
aaaggttggtgggaaggaggtgaaggtcaacaggaagctaggaaggtcagcaaagcacac
acaggtggacgtagaccagacagtgactggatccaggtccatgctgaccaggagtatgtc
atagaggtcacacttaagagacttaacaagttcaagaaaagagacagcaaagcccatgct
cctagattccccaagccaaaagacgagggttggtttttgatcattggagacatagagaat
cgcgaggtggtggcattgaagagggtaggatacctccgaggtgcttcccggcagagtctg
gccatctacacccccgagaccctcgggcgggtcatctacacgctttacctgatgagcgac
gcataccttggcctggatcagcagtacgacatctgtctggatatcattccggctagtata
gagacccaggtcaacaccgaaatatctaatgaactcaatgatctggatttcagtgactcc
tga
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integrated database retrieval system
