Magallana angulata (Portugese oyster): 128186805
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Entry
128186805 CDS
T09348
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03030
DNA replication
canu03410
Base excision repair
canu03420
Nucleotide excision repair
canu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128186805
03410 Base excision repair
128186805
03420 Nucleotide excision repair
128186805
03430 Mismatch repair
128186805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
canu03032
]
128186805
03036 Chromosome and associated proteins [BR:
canu03036
]
128186805
03400 DNA repair and recombination proteins [BR:
canu03400
]
128186805
DNA replication proteins [BR:
canu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128186805
DNA Replication Termination Factors
ELG1-RFC complex
128186805
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128186805
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128186805
Check point factors
HRAD17(Rad24)-RFC complex
128186805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
RCF1-5-like_lid
AAA_assoc_2
AAA_11
RuvB_N
AAA_22
AAA_24
AAA_5
AAA_14
DNAX_ATPase_lid
DUF815
AAA_16
AAA_30
DEAD
AAA_7
ResIII
PhoH
Mg_chelatase
AAA_2
TIP49
HAM1_N
AAA_19
nSTAND_NTPase5
bpMoxR
AAA_28
RNA_helicase
DUF8067
Gp44_lid
ATPase_2
Motif
Other DBs
NCBI-GeneID:
128186805
NCBI-ProteinID:
XP_052712670
LinkDB
All DBs
Position
6:6102596..6114621
Genome browser
AA seq
336 aa
AA seq
DB search
MSTKEYPTTDRNNPNLPWVEKYRPKQLDELISHKDIISTIDKFVKEDRLPHLLFYGPPGT
GKTSTILAVAKQIYSPKEFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKSGYKIVIL
DEADAMTRDAQNALRRVIEKFTENTRFCIICNYLSKIIPALQSRCTRFRFGPLGTDQMVP
RLQHVIQQEQCNVTEDGMKALVTLANGDMRKALNILQSTHMAHDVVNEDNVYTCVGHPLR
RDIENIINWVLNENFTSAYNNILEMKTEKGLALQDILTEVHTYVHRLDLPINVKIHLLDK
MAEVEHRLASGTNEKIQLSSLIAAFQVARDLIVQET
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaaagagtatccaacaactgatagaaataacccaaatttgccatgggttgaa
aagtacagacctaagcagttggatgaacttatttctcacaaagatattatctcaacaatt
gataaatttgttaaagaagacagactgccccatcttttgttttatggacctccaggaaca
ggaaaaaccagcactattcttgcagtagcaaagcagatctactctcccaaggaatttaac
tctatggtgttggagttgaatgcatcagatgatcgaggaataggtatagtgcggggacag
attctcagctttgcaagtacaagaactatatttaaatctggttataagattgtgatacta
gacgaggctgatgctatgacaagagatgcacaaaatgctttacgtagagtcattgagaag
tttacagagaacacacgtttttgcatcatctgcaattacctttcaaagatcatccccgct
ctccagtctcggtgtactcgcttcaggttcggacctctgggtactgaccaaatggtgcca
cgccttcagcatgtcatacaacaagaacaatgtaatgtcacagaggatggcatgaaagcc
ttagttactctagccaatggtgacatgaggaaagctctaaatattctccagagcacacat
atggctcatgatgtggtgaatgaagacaatgtttatacatgtgtgggccatccacttaga
agagacatagaaaacatcatcaactgggtcctgaatgagaatttcacctctgcgtacaac
aatattttagaaatgaagacagaaaaaggtctggctcttcaagatatcctgacagaagtt
catacatatgtacatagacttgacttaccaattaatgtaaaaattcatcttctggacaaa
atggcagaagtagaacataggctggcctctggcaccaatgaaaagatccagctttcatct
ctgatagctgcattccaagtagctcgagatctcattgttcaagaaacataa
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integrated database retrieval system
