Magallana angulata (Portugese oyster): 128187050
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Entry
128187050 CDS
T09348
Name
(RefSeq) uncharacterized protein LOC128187050
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128187050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128187050
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128187050
Spliceosome [BR:
canu03041
]
Complex C
Other components
Step II factors
128187050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_DEAH11
Helicase_C
DEAD
IBR
OB_NTP_bind
IBR_1
AAA_19
RRM_1
KH_DEAH11_2nd
AAA_22
IBR_2
zf-RING_2
Helicase_RecD
AAA_30
Flavi_DEAD
RRM_DEAH11
zf-RING_11
PBP-Tp47_a
Motif
Other DBs
NCBI-GeneID:
128187050
NCBI-ProteinID:
XP_052713089
LinkDB
All DBs
Position
6:48945138..48966230
Genome browser
AA seq
2670 aa
AA seq
DB search
MGQSPTKEPDKTERVETRSMTTERQRSSDYFIRELQSSQISTPISRTSASSSGEANYKRR
YSMEDQHLDQLLVEKTKYKPIDVNQTREHKLITSVPLDLSSHEKGKRGSMLDKAVDVRQK
KVERGSVNSKYSDADKLSSAKQLNFKPEEHSSLSHSSTSNKQYVFEKGTDLKQRSIASVP
LMKRTPVSRYTTVPDETMHLKQNNADLLHSKELKSKTSGPLAVSNSSTDSKTVLDKSTCL
EQQKATRQYTEKRLHMQSNTHVLTQKMYPSQSKTDSFPAHEVKVENDERLVLLNLSKRDQ
LQATNSSSDIIITNGKEYKMPHYYKEEDCKPKNEKTEGPAVDMKLASKVACKEKPPEKIL
KDLTNPGSMSKGKTVLVIPPVTGTSKNMLDTTKNRKIVEKGYENMFWAENSQRNESREVS
DVLKKTDSQFFEKTKEIKCSFDPTQRCIDGLDSIRGTRQRSEDKDDCVFLLNTHMKDQKV
SVDSSGPKTKTLSKKESDLKENLKNISNQLEDVAVTKIIFRSEGSSVVGKETKRLPLKMS
EVKQAKSQGIKDEKGKSENSVESRTNYSTTIRSDLTTLKTTNGESITIRSKDNTCQMQKP
LMVMEKEEKNADKCNVDDGVSGISKDEKDSKTEKYYHRIGTTISARKVTKYEIGEHVNTS
PRVLCRNEIGGITSSEMRANLLDDQDQNITVKDLRHETTTYGKDEKCLGLCNIPENVRSN
QFQQTANKQDICKNTGSLNEGYPKSKSQGNNSEKMEEPLIKNTIVETTEYSAMKKEKNDI
AVKNKISSITTSYEKFEEVMKCELDMSRSGRRDLISSNYGRNPSQQEKTGSDNRENPNMK
SKEFKKVICDAVKKQKDSLTAQNVESNTITNSAEIKEIKKHETEPPERKSKLSSTPKKDT
VKLHQNCNDQQMTDSKNISSQKQLLPGKITCEEAIEVESNVKCVKSKVTENPRNIYKESS
RKNSTKSRRMKKELSSEKKMDGMVQRNIPKVKTPLPKLPHSADDERYKGEEKDFVTYTLT
VWKHIKEETDFLAHLVGIVADIRFQIISLKNDSKNDTTTAMFRFKSNGDAKKFQSCLKSN
KDNLPYRYHFQREGLSTMTFKVITKKSQYIQERTLEVLGSHQEKQRDTERKLSALSRAPK
KKFIELAAYEQREAQKKAFSDKLEELKRQQTEFQLCLSDVIQQVESYKAGNIEPKKFDSV
INKFEVECSRLEQALPIYAKRTEIIDTILQNQVSIILGETGSGKSTQITQYILESSISSS
GKVICTQPRKVAAMSLAQRVASEMKSNVGDLVGYQVGMKSKLCNHTKVLYMTDHMLLNEC
LKDPSLMNYSCIVIDEAHERSVYTDLLLGMIKKCLPQRPELRVVVTSATIDPEVFVRYFG
GPDICPVLKVSGRMFPVEIEWLKISYGPEVADEYEIKAIEKAAEIHKSEPPGDILVFLTS
QVEIEQCAEKLETLLRGKKDHWILPLHGKLQTDEQNLVFKCASKGRRKIVLATNVAETSV
TIPGIKYVVDTGAVKELSYDPKKKVSALRIAKVTKSSADQRKGRAGRTGPGKCYRIYSQE
DYDAMLPTSIPEIQKIHLGHAILKLLQLDVDPLEFDFVQAPEKISMENAFQHLTKLGAIE
GGKIAPLGRWIAKLPFEPNLSVLVHDSIDHNVGLEGIIIAASCTVAGSLFYRGGTKEQKE
TSDKHKVPFCHKHGDHFTNLNVFKEWNAVHEKQKGKWCRDNSINGKAMRSIRDCANEILH
ILKKDLDIHIKFEFTDTHVERILQRLLFRSFQTNLCHYLGHEKAGYYFIDKNQQVIMHPS
SAFQSLASFPKWVIVERVMQTSRDFALNITAVADEDVEEALVDGSLDFDIEDVESRRVAP
ILTEYVGTHGHREFVGPRYSKVRAMQENLSVQCTNSVFVIDADRDKGEISIYAPVNTKDI
STCTLKTAIDPIKERIRSETVEHPVLQDFQNVRISIGAGGQTKELLYQDEYKNVFVFGDP
SSFGSNDEMKQWFEKFGRIHSYIPKSPKNDNARYLGQIIYEKSECARNAVIATRRNEFEF
SAKPPKGIGKSEEADLLKARLTWCRRRSRGFGFVEILNKDKLDEIIITSALNNITVGGKR
VRVKPARNEMNPDEEKNELHVSGLGDLVNEDILRESFFHHFDISENDIGKVNVIRERVNT
TPEMMFAFKTKLQSAFRKYIKQNMFFVSVVEPKPADFTYQAFVSFKDPEEGFDACSMLKN
NLFIGENAVTVSPEIKTRLFILAPVYARVQKEIEKYCEKIKTEDGGRRLTIKQLKNENFA
IDIDADSIENMVHTRNKVQNMLEGETVDLERIPTLRYLFTGDGQTKVGKIMKKTNTLILL
DHRNTSLSIHGKMKEREMAIRKIEKYVGKLSSSKLRVYDLKGETKPPGLMKVVIMMHGVN
LKGLKELSELSTVELDHRSHRIRMLGSDEAVDKAVAEIDGLMNHLREKCNIPNSNQPECG
ICLCEISETEIYRLESCGHPYCRDCIKMNIESAMQNKDFPLKCCHDECEMLWAWKDFVNM
TKQGFCNLQNIITSSLSCFVRENKDKARYCITPDCPMVYKVSATGGRIVCGVCRVGMCNK
CHVEYHNGMSCAMYQMENGNDGSGLREWMRRDPNNRKLCPNCFAGIEKTGGCQHMECRDC
KVHICWTCMKFFSSGPQCYGHMDKEHGSFM
NT seq
8013 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaagtcctaccaaggagccagataagacagagagagtagaaaccagatctatg
acaacagaaagacaaagaagctctgattatttcatcagagaattgcaaagttctcaaata
agtactcctatatctcgcacctctgcatccagctctggagaagcaaattataagagaaga
tactctatggaagaccaacatttggatcagttgttggtggagaaaaccaaatacaaaccg
attgatgtcaatcaaacaagagaacacaaattgatcactagtgtacctttagatttatca
agccatgaaaaaggaaaaagaggatctatgcttgacaaagctgtagacgtgagacagaaa
aaagttgaaagaggttctgtgaactcaaaatacagtgatgcagataaattatcttcagct
aagcaactgaattttaaaccagaagaacattcaagtttatcccattcttccactagtaac
aaacaatatgtatttgaaaaaggcacagatctgaagcagagaagtattgcaagtgtacct
ctaatgaaaagaacccctgtttcaaggtacacaactgttccagatgagacaatgcacttg
aaacaaaacaatgcagacttattgcattctaaagaactgaaatcaaagactagtggacct
ttagctgtatccaacagttcaacagatagcaaaactgtgcttgacaaaagcacatgttta
gagcagcaaaaggctacaagacaatatacagagaaaaggctacacatgcaaagcaataca
catgttttaacacaaaaaatgtatcccagtcaaagcaagactgattcatttcctgctcat
gaagtaaaagtagaaaatgatgaacgtttagtccttctcaacttgtctaaaagggatcaa
cttcaagcaacaaacagtagcagtgacattataataacaaatggaaaggaatacaaaatg
ccccattattacaaagaggaagattgtaagccaaaaaatgaaaaaactgaaggaccagca
gttgatatgaaactggcatcaaaagttgcatgcaaagaaaaacctccagagaaaatttta
aaggacttaactaaccctggcagtatgagcaaaggaaaaacagttctagtcataccacct
gtgactggtacctcaaaaaatatgttggatactactaagaataggaagatagttgaaaaa
ggttatgaaaatatgttttgggctgaaaatagccaaagaaatgaaagtagagaggtttca
gatgttttgaaaaaaactgattcacaattttttgagaaaacaaaggaaataaaatgttct
tttgatccaactcaaaggtgtatagatggattagacagtataagaggaaccaggcaaaga
agtgaagataaagatgactgtgtatttttattaaatacacatatgaaggatcagaaagtg
tccgttgactcatcagggccaaaaacaaaaactctctcaaaaaaagaaagtgacttgaag
gaaaaccttaagaatatttccaaccagctagaagatgtagcagttacgaaaatcattttt
cgttctgaaggaagctctgtagttgggaaggagacaaaaagactacctctaaaaatgtcg
gaagttaaacaggcgaaatcacaaggtataaaagatgaaaaaggcaaatcagaaaacagt
gtagagtctagaactaattactcaacaacaattagaagtgatcttaccacccttaaaaca
acaaacggagaatctataacaataaggagtaaagataatacatgccagatgcagaagcca
ttaatggtaatggaaaaggaagaaaaaaatgcagacaagtgcaatgtcgatgacggggtc
tctggtataagtaaggatgaaaaagattcaaagacagaaaagtattatcatagaattggg
acaacaataagcgcaagaaaagtgacaaaatatgaaattggagagcatgtgaacactagc
ccaagagttctttgtagaaatgaaattggtggaattacttcatctgaaatgagagctaat
ctgttggatgatcaggatcaaaatatcactgtaaaagatttgcgacatgaaaccactaca
tatggaaaagatgaaaaatgccttggactctgtaacattccagaaaatgtaagaagcaat
cagttccagcaaacagcaaacaaacaagatatctgcaaaaatactggttccttaaatgaa
ggataccccaaatcgaagtcccaaggaaataattcagaaaaaatggaggaacctttaata
aaaaacacaatagttgaaaccacagaatattctgctatgaaaaaggaaaaaaatgatatt
gctgtaaagaataaaatatcaagtatcacaacaagttatgagaaatttgaagaagtaatg
aaatgtgagcttgacatgtcgcgttctggtaggagagatctgatatcaagcaactatgga
cgtaatcctagtcaacaagaaaaaacaggttctgataatcgggaaaatccaaacatgaaa
agcaaggagtttaaaaaagttatctgtgatgctgtgaagaaacagaaagactctttgact
gctcagaacgtagaatcaaatactattacgaatagcgcagagataaaggaaataaagaaa
cacgagacggagcctccagaaaggaagtccaaactgagcagcacgccaaagaaagataca
gtgaaattgcatcaaaattgtaatgatcaacaaatgacagatagcaaaaatatttcaagt
cagaagcagcttttaccaggaaaaattacatgtgaagaagccatagaagtggaatcaaat
gtgaaatgtgtcaaatccaaagtaactgaaaacccaaggaatatttacaaagaaagcagc
agaaaaaattcaactaaatctagaagaatgaaaaaagaactttcaagcgaaaagaaaatg
gatggtatggtgcagagaaatattccaaaagttaaaacgccattaccaaaattgccacac
tctgctgatgatgaaagatacaagggagaggaaaaggattttgtgacatacacactgact
gtttggaagcacataaaggaggaaacggatttccttgctcatcttgttggtattgtcgca
gacatacgatttcaaatcatttccctaaaaaacgattccaagaatgatacaactactgcc
atgtttcgttttaaaagtaacggagatgcgaaaaaatttcagagttgtcttaaaagtaat
aaagacaatttaccatatcgataccattttcaaagagaaggattgtccaccatgacattt
aaagtaataaccaaaaagtcgcagtatattcaggaaagaactttagaagttttaggatca
catcaagagaaacagagagatactgagagaaagttatctgcgttaagcagggctcccaag
aagaaatttattgaattagcagcttatgagcaaagggaggcacaaaagaaagcctttagt
gacaaactagaagaactgaaacgacaacagactgagttccagctgtgcttgtctgatgta
atccaacaggttgaatcatataaagctggaaatatcgaaccaaagaaatttgattctgta
attaacaaatttgaagtagagtgttcgcgattagaacaggcattgccaatttatgctaaa
agaacagaaattatcgacacaattcttcaaaaccaagtttcaataatattaggagagacc
ggatccggaaaaagtacacaaattactcagtacatcttagagtcttctattagctcttct
ggaaaagtcatttgtacgcagcctcgcaaagtagcagcaatgagtcttgcacaaagagta
gcgtcggaaatgaaatcaaacgtaggtgatcttgttggatatcaagttggtatgaaatca
aagctatgcaaccacacaaaggttttgtacatgacagaccacatgcttttaaatgagtgt
ttaaaagatccatcgttgatgaattattcttgtatagtgattgacgaggcacatgaaaga
agcgtgtatacagatcttttgcttggtatgataaagaaatgtttgccccagcgaccagaa
ctccgtgttgtagttacttctgcaaccattgatcctgaagtttttgtgcgatactttggt
ggaccagacatatgtcctgtcctgaaggtctctgggcgtatgtttcctgttgagattgag
tggcttaagatttcttatggccctgaggtagctgatgaatacgaaataaaagccattgaa
aaagcagcagagattcataaatccgaacctcctggagatattttggtgtttttaacttca
caagttgaaattgaacaatgtgctgagaaacttgagacattgctccgaggaaagaaagat
cattggatacttcctttacatgggaaacttcaaacagatgaacagaatttggtatttaag
tgtgcttcaaagggaagacgaaaaattgtactggctactaatgtagcggagacatctgtg
acaattccaggaataaagtatgttgtcgatactggagctgtgaaagaactctcatatgac
ccaaagaagaaagtaagtgcattgcgcattgcaaaggtcaccaaaagttccgctgaccaa
agaaaaggaagggcaggaagaacaggtccaggaaaatgttacaggatatattctcaagaa
gattatgatgcaatgttgccgacttctattccagaaatacaaaagatacatttgggtcat
gcgatcctgaagctgttacaactagatgttgaccccctagaatttgactttgtacaagca
ccagaaaaaatttctatggaaaatgcttttcagcaccttactaagcttggtgcaatcgaa
ggggggaaaattgctccattggggagatggattgcaaagcttccatttgaacctaattta
agcgtactcgttcatgactcaatagaccacaatgttggattagagggaataatcattgca
gcgtcatgcacagtagcaggatccttgttttatcgaggaggtacgaaagaacaaaaagaa
acatcggacaaacataaagttccgttctgtcataaacatggagatcatttcacaaatctt
aatgtttttaaagaatggaacgcagttcatgaaaaacaaaaaggaaagtggtgcagagat
aattcaatcaacgggaaagctatgcggagcattcgtgattgtgcaaacgaaattttacat
attttgaaaaaagatttggacatccacatcaaattcgaatttactgatactcatgttgaa
agaattttgcagagactattgttcagatctttccagaccaacctgtgtcattatcttggt
cacgagaaagccggatactacttcatagacaaaaatcagcaagtaattatgcacccttcg
tctgcattccagtcattagcatcttttccgaagtgggttattgttgagagagtaatgcaa
acatcgcgagattttgctttaaatataacagccgttgctgatgaagatgtcgaagaagcg
ctagtggatggttcattagattttgacattgaagacgtagaaagtaggcgtgttgcccct
atcctaacagaatacgttggcactcatggtcatagagaatttgtaggtccacgatacagc
aaagtgagagctatgcaagaaaatctttcagtgcagtgtacaaattcagtgttcgtgatt
gacgcagatcgggataaaggagaaatttcaatttatgcaccagtaaacactaaggacatt
tcaacgtgtacactgaaaactgccatagacccaatcaaagaaagaattcgatcagaaacc
gtagagcacccagtgttgcaagattttcagaatgtacgaatatccattggtgctggaggc
caaaccaaagaattactctatcaggatgaatacaaaaatgtttttgtttttggcgatccc
tcgtcatttggatcaaacgatgaaatgaaacaatggtttgaaaaatttgggcgtatccat
tcgtatatccccaagtcgccaaaaaatgacaatgcccgttaccttggtcagattatttat
gaaaaatctgaatgcgcacggaatgcagttattgctactagaagaaacgaatttgaattc
tctgcaaaacccccaaaaggaatagggaaatcggaagaagctgatttactgaaagctagg
cttacttggtgtagacggagatctcgtggctttggatttgtagagattcttaacaaagac
aaattagatgagatcataataactagtgctctaaacaatataactgtaggtggaaaacga
gttagagtgaaaccagccaggaacgaaatgaacccagatgaggaaaaaaacgagttgcat
gtatcaggtcttggtgatctcgtaaatgaagacattttgcgagagagtttcttccaccac
ttcgatatttcagaaaatgacataggaaaagttaatgtcatacgagaaagagtaaatacc
acaccagagatgatgtttgcgtttaaaacgaaactacagtctgctttcagaaaatatata
aagcaaaacatgttttttgtgtctgtggttgaacccaaacctgctgattttacataccaa
gcctttgtttcttttaaagatcccgaagaaggctttgatgcgtgttccatgcttaaaaat
aacctttttatcggagaaaacgcagtaacagtttctcctgagatcaagacccgactcttt
atactcgcaccagtctatgcgcgagtacaaaaagaaattgagaaatactgtgaaaaaata
aaaacggaagacggagggagaagactcacaataaagcagttgaagaatgaaaactttgct
attgatattgacgccgatagcattgaaaatatggttcacacaagaaacaaggtacaaaac
atgcttgaaggtgaaacagtagacttggaaaggattccgacacttcgttatcttttcact
ggagatggacagactaaagttggaaagataatgaagaagactaatacactgattttgttg
gatcacagaaatacttccctgtcaattcatggaaaaatgaaagagagagagatggcgata
agaaagattgaaaagtacgtagggaaactgtcttcctcgaaattgcgagtgtacgactta
aagggcgaaacaaagccaccggggttgatgaaggttgtgataatgatgcacggggtgaat
cttaaaggtctgaaagagttatcagagttatcgactgtagagttggaccacagaagtcat
aggataaggatgttagggtctgatgaagcagttgataaagcagtagcagaaatcgatggt
ttaatgaaccacctgcgagaaaaatgtaatatcccaaactcaaatcagcccgaatgtgga
atatgtctttgtgaaatatctgaaacagaaatatataggttggaatcatgtgggcatcct
tattgcagggattgcataaagatgaatatagaatcagcaatgcaaaacaaagatttcccc
cttaaatgctgccacgatgaatgcgagatgctttgggcatggaaagattttgtcaatatg
acaaaacaagggttctgcaatcttcagaacatcataacttcatcgctgtcttgttttgtg
agagaaaataaagacaaagcgcgatattgcataactccagattgccctatggtctacaag
gtcagtgcaacagggggaagaattgtttgtggagtttgtagagttggtatgtgtaacaaa
tgccatgtcgaataccataatggaatgtcttgtgcaatgtaccaaatggaaaatggaaat
gatggatcgggtctgcgggaatggatgcggcgagatccaaataaccgaaaactgtgtcca
aactgttttgcaggaatcgagaagactggtggttgtcagcatatggaatgtcgagattgc
aaggtacacatttgttggacatgcatgaaatttttcagctctggaccacagtgttatggt
catatggataaagaacatgggagttttatgtaa
DBGET
integrated database retrieval system
