Magallana angulata (Portugese oyster): 128187220
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Entry
128187220 CDS
T09348
Name
(RefSeq) transcription initiation factor TFIID subunit 4B-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128187220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
canu03021
]
128187220
03036 Chromosome and associated proteins [BR:
canu03036
]
128187220
Transcription machinery [BR:
canu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128187220
Coactivators
SAGA/TFTC/STAGA complex
128187220
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128187220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
CryBP1
Motif
Other DBs
NCBI-GeneID:
128187220
NCBI-ProteinID:
XP_052713456
LinkDB
All DBs
Position
6:38397744..38408308
Genome browser
AA seq
913 aa
AA seq
DB search
MATTNSLDDILSTEIDENAVNALVGSLESQLASTTHKDTAHSISDASMNNNHISNASAPV
ACTSTVFINNFPTSASKNMTIQNNVALNSSNISHLKTSESQLLGLNSIVSNVNSSEGGDL
SVNANNINRNSPVPVNHVRIASHPQTVANSRNSPSPSVSGQLNNVSVASVRSSTPNQVVI
NNGQSLPNVSSIVNSANSANFNATDHKPVIRSTHSSPLNQNSSQDVKPGPTQIVNIKHEP
VGSPHRGVLSVKQETGSPSSGFGVKQEHQLAIQPVPGAPHNVPHPSVHLVQGKGPVTGNP
SVITVRTPGQTHPSQVVMQPQIITTHSSSAQMHVVSVSGCTVATRPTGTVQMTQGKNINP
RMATSAAFRPQQISIAPRPGTTQNTIALPPGVQIPPGAQLVRNEQGQLVFVIQQPAATSA
ATGHRMFVRQPANSPGPVRPHQIVTIQPPGMNRQVNLSTAATTATPVSTLIRTTAPVGAP
HTTPSGRTSLPGAPQQPPDNVKKCKNFLSTLMKLAQSQPQQTVKNVRELIQGLIDGKVEP
QTFTEKLQIELRSSPQPYLVPFLKKSLPALRQALIANTMTIEDVKAPPLEVLQPVVSIGN
LVHTQLHPSTHHAAVRGQHVIGIPKTVTAVTGKAPHHTGLPAQGRTSTPHKEKTKYDSLK
DDDDINDVATMGGVNLSEESKNILASNADFIGTQIRSCKDEAFLYHGPLLARITAIAKKH
GIDDISSDVANLVSHATQERLRDLLEKLDTIAEHRIEIYKMNERFEASTDAKSQLKFLEE
LDKMEKKRHDDQEWEKIMKAAKSRSKNEDPEQQKIKQKAKELQQAEIERMRQEEANQTAL
AAIGPRKKRKTDFGEISSSGSGGLSVSNGGSSSSKTTSTRQRIKRVTLRDVLFLMEQERS
LGKSTLLYKTFLK
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgaactctctcgacgatattttgtcaacagaaatcgacgagaatgctgtt
aatgccttagttggttctttggagtcacagctagcttccacaacacataaggacactgca
cattctatttctgatgcttctatgaacaataaccatattagcaatgccagtgctccggta
gcatgcacttctactgtgtttataaataatttcccaacatcagcttcgaagaatatgaca
attcaaaataatgtagcattaaatagttcaaatatatctcatcttaaaacatctgagtct
cagttactagggttaaattctattgtgtcaaacgtgaattccagtgagggaggtgattta
tctgtaaatgcaaacaatatcaataggaactctccagtgcctgtgaaccatgtaagaatt
gcttctcatccacagacggttgcaaattctcgaaattcgccatcaccatcagtatcagga
cagcttaacaatgttagtgtcgcaagtgttcgctcatcaacaccaaatcaagttgtgata
aacaatggacaaagtttaccaaatgtgagcagtattgtgaattctgcaaatagtgctaat
tttaatgcaactgatcataaacctgtcatacggtctacacacagtagtccgctaaaccaa
aattctagtcaggatgtgaaacctggaccaactcaaatagtgaatatcaaacatgaacct
gtgggatccccccatagaggggttttaagtgtgaaacaggagacaggttctccaagctca
ggatttggtgttaagcaggagcaccaactagcaatacaacctgtgcctggtgcaccacac
aatgtgcctcatccaagtgttcacttagtgcagggaaaaggaccagtgaccggaaatcca
agtgtgataactgttaggacacctggccagactcacccatctcaagttgttatgcaacct
caaatcatcacaactcattcgtcgagtgctcagatgcatgttgtgtctgtgagtggttgt
actgttgccacacgtccgactggaacagttcaaatgactcaaggcaaaaatatcaatccc
agaatggcaactagtgccgctttcagacctcagcaaattagcattgcacccagaccagga
acaacgcaaaacactattgcgttaccacctggtgttcagatacctcccggagctcagctg
gtcaggaacgagcagggacagttggtgtttgtcatccagcaacccgcagcaaccagtgca
gcaacggggcaccggatgtttgttagacagcctgccaattcgccaggtcctgttcgccct
catcagattgtgacaattcaaccgcctgggatgaaccggcaagtaaatctcagcaccgcc
gctaccacagccacgccagtgtccaccttgatccggaccacggcacctgttggagccccc
cacactaccccctcaggtaggaccagcctgccaggagcaccccagcagcctccagacaat
gtcaaaaaatgcaagaatttcctgtccactcttatgaaactggcccagagccaacctcaa
cagacagtcaaaaatgtccgagagctaattcagggcctcatagatggaaaagtggaacct
caaacatttacagagaagttgcagattgaacttcgctcttcacctcaaccatatcttgtg
ccattccttaagaaaagtctgccagccctgcggcaagcattaatagccaacaccatgacg
atagaagacgtcaaggctcctcccctcgaggtcctccaacccgtggtatccataggcaac
ctagtccacactcaactccatccgtccactcatcacgcagctgtccgaggccaacacgtt
attggaattcccaaaactgtgacagcagtgactgggaaggctccacatcacacaggtttg
cctgcccagggtcgaacctccactccccacaaagaaaaaaccaaatatgattctctcaag
gatgatgatgacataaatgacgttgccactatgggtggtgtgaacctctcggaagaaagt
aagaatattttagcgagtaatgctgactttatcgggacacaaatccgctcctgtaaggat
gaggcctttctgtaccatggtcctttactggctcgaataacagccatagcaaagaaacat
gggatagatgacatctcgtcagatgtggctaacctggtctctcatgcgacacaagaacga
cttcgagatctcttagaaaaacttgacactatagctgagcacagaatagaaatttataag
atgaatgagaggtttgaggcttctactgatgccaaatcacagctaaagttcctcgaagag
ctggataagatggagaaaaaacgccatgatgatcaagaatgggaaaaaataatgaaggca
gcaaagagtcggtcgaaaaatgaagaccctgagcagcagaagataaaacaaaaagccaaa
gagttacaacaggccgagatagaacggatgaggcaggaggaggccaaccaaacagccctg
gcagctataggaccgcgcaaaaagaggaaaacagattttggagagatcagttcttctgga
agtggagggctaagcgtcagtaatggaggaagctcatcttccaaaacgacaagtacgaga
cagagaatcaaaagagtgacactaagagacgtgctgttcttgatggagcaggaacgttcc
ttgggcaagtccaccctcctctacaaaacattcctaaagtga
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