Magallana angulata (Portugese oyster): 128187299
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Entry
128187299 CDS
T09348
Name
(RefSeq) rotatin-like
KO
K16484
rotatin
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
canu03037
]
128187299
Cilium and associated proteins [BR:
canu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128187299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
128187299
NCBI-ProteinID:
XP_052713595
LinkDB
All DBs
Position
6:41614212..41637416
Genome browser
AA seq
2241 aa
AA seq
DB search
MAVQTRQDINFQGIFKKLGHNLEEIRVRSLENLLSKLEHNLVCDSDLVNERHLMIRLIEW
FNFPNPSKQGDVLHLLLRLSKHSSAAQILQDIGAIEFLSQLRSDVPKSLQPIVDQILENT
MRLPEVADETLSPTCTYQRRGFSTVSEAGGALTASDGASEVAPSLTSVSTLPPQEFMDPP
HIITGRENSDGYFKDKVYLLQEQQRENNDGVSNTFLATTFPWLALTSTDRHVIQSTNSSL
QSRESHLLASSCEFLSDVVFQDFPAEIFLQRPNIVRNLLGLLGAVPDVNTHLTIHAAKTL
GDLTSALRSRLRYYQDPSLFTSKQDFSSSSSSPFSNSPSILSNQSGRTDSHSPLAGWGDT
RPRGDGREVDSSSSVSSANSRNSSVSIGPDVTNPEETDIDDMRSLQSMQITLPQYCSLVL
EKAVPLLKTGAEGVVTQLMYLLNQVLEILTSIVTMEIWQDGSSRAREIAERLSATFEALG
DVINYHHHGEVSRGNPEKDKGDVIQHRLAFIGVTGFTSRLLKQLVPVQQGRKLLPATLVK
SMELVIFDEALAYSYPDIQITVLAYIQNLSPDKYTLFVDTAKISQSVQKSCQFLMLCQEE
AYKGSSELIDMAEASIQSLPYHLHLPLVSEFVKLSSSICARTSQDKALQNKCVEVLLRFL
SHPLPEVKEQTYSTIKQVVKGSLNVNEAADPSSRACYLSRFLFSSDIMYEIIVFGLNDSN
PKVSQTASDVICHILDGQLLMTEDLWKEVLNALMRSLPVLETYVDMGTKLGSTLLSLTDP
TEVQAEGGLVYLEKLRGCLRMMFSTDVRARAEALKRLAWFLSNEQNSNEKLPIFASLDVT
NLTSIFIVDMQRSLDEDLGRSVFQIDGMRKVYEIFSSSSVDPSVKKSAVDQLAIILQDHN
LHAPFKAEGGVETVLKHLKLGLVRNDDAQSEYIHYLPACAAILRPLVHFDYKLRHRLARD
QEVYLVLLRVAFLHQRDERTCYEVAHILILLLFDEVAKFDLGGGTVPVVHFSIPSVLRKR
CRLPFRPACHHDNSPHTVELPLDPDPVQTDRPLEMLRISWNVAWHGGMEKLLKHLAQSKN
SSQKDKMTEFSPRLQLSFIERKIVQCSHLAEGIKQTLYSVSNATSHNAVSAALGQLLSYL
VNSYGYEGSEVMFGQEWLSSIGRFLKVHPSMPDDESLLQEVLRFISMALRLSGEVTEGTL
QALGEVLYQPSGPLIGLSHRTSVRGETRDVPENVNIKRTLDKELLSFISTYNCKLPYVLC
RRLKFQQLRGDLCHQLLQRLNVTDAPHFYNLASLEGTLQCLMHVTARPGWSSESTELGGE
ALCSQLLACLLEVVSAFHIGRGGTSMSYMGKGVTKAATMCLRHLAYEMSTTAENKKWAEQ
WIYVQQRADGQNSAEVEEHQGLDWLLTLWSYRDPEVRVAGLGIGVALTLTESGRTVLTSH
CVHIPGGVWGVAFSILLDQSECSMVRQQAALLLVNMTSQPMPCGSVELEENVWQGPVVAD
TESKVSLVGLTALMALLHHSHFYQEMLVVFTNFYAQPTIQQISATELMISPHLSSASSES
TMSTSADLTSVSQQGQPVWSRGGGDSRGKIKTGIRNVQTGVVQQVADSSGSTLMAGEGGS
DIISVATPSLVASISQLLRNLVVIAPADTFTCLKRDSFVQILMNMVDTNLLEAYMLEMEG
HVSYDQYEIVFGDLLEMYASVMSLLTACVVYDTPTRQDILANKDFIMSALALMTIRFQGS
CDVESKLQELWGTVLFFFVTNLQLQGASTLAVVTECLPKIWTSFSDNLCNILTRRLDYGH
DLFSKCLQFLSALFSEEGKLQGRQLDLSNSTITDLLDSDFGKEDKEETSAGCHLCKALVP
VYEQAVIRTTDHKNTDRLHSAAALRNLLAVSQKAKGTALQMGFVETTIENIKQLHSKINM
EALQLGKTAAKKKEDALVPDLIITLDVLRNLLFMNEDAKMACYHSGLPTVIHKIWPWCQM
EPQLMLSTVSLLSTYAAKCLTATSSLAYTSPSSTSTTQNARSSSQQLGANSLVHCLLKLA
GRDNIKEPLLKALYGLLATLALSSECRNIMFKSNFFREFLELNPRKTKKSKQVKKMEVYW
LELMLNLSFSTEGQQMILKTGDSVDLLLDFVDCGNGPGLEYSVLIIRNMCCHCSSKPKLL
ANDKLLPLLLSCLDKDFGKVQTIAASALLGLVFNNQKAKVMMKNANLLPKLQEILSNLNN
LQSTPEKCVQDLTSVLITVSE
NT seq
6726 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcaaacaagacaagacataaattttcagggaattttcaaaaaattaggccat
aacttggaggaaattagagtaagaagtcttgaaaatcttctctcaaagttggagcataat
ttagtatgtgactcagacctggtcaatgagcgccatctcatgattagactcattgagtgg
tttaattttccgaatccctcaaagcaaggagatgtgcttcatcttcttttgagattatca
aagcattcttctgctgctcaaattctccaagacattggagcaattgaatttctgagccag
ttacgatcagatgttccaaagtctttgcaacccatagttgatcaaatccttgaaaacact
atgagattgccagaggtggcagatgaaacccttagtcctacctgtacttatcagaggagg
gggttcagcacagtttcagaagcaggaggagcacttactgctagtgatggggcctctgaa
gtggctccatcgcttacatctgtctcaacgctaccacctcaggaatttatggatccccca
cacataatcacagggagggagaattctgatggctacttcaaagacaaagtttatctactg
caagaacaacaaagggagaacaatgatggtgtgtctaatactttccttgcaaccaccttc
ccttggttagctttgacttccacagacagacatgttattcagtcaacaaactcttcctta
caaagtagagagtcccatcttttggctagttcctgtgaatttctaagtgatgtggtattt
caagattttcctgcagagatatttttacaaagacctaatattgttcggaatctgctaggg
cttctgggagcagttccagatgttaacacccacttgactatccatgcagccaaaaccctt
ggtgacctgacctctgctttgaggtcaaggttaagatattatcaagacccatcgttgttc
acgtcaaagcaagattttagttcgtcttcctcttcacctttctccaactccccgagcata
ctgtctaaccagtcagggaggaccgacagtcacagtccactggcagggtggggagacact
cgcccccgaggagatgggcgggaagttgactcctcttcctcagtcagttctgccaattcc
cgcaactccagtgtcagtattggacctgatgtgacaaatccagaggagacggacattgac
gacatgagatccttacagagcatgcagattaccctcccccagtactgctccctggtcctg
gagaaggcagtccccctcctcaagacaggagctgagggcgtggtcacacagctcatgtat
ctcctcaaccaggtgctggaaatcctcaccagcattgttaccatggagatctggcaagat
gggtcgtcaagagcaagagaaattgctgagagattatcagcaacatttgaggctttaggt
gatgtgataaactatcatcaccatggggaggtaagccgcgggaatccagagaaggacaag
ggcgacgttatacaacacagattggcgttcataggagtcacaggattcacctccagactg
ctgaagcaattagttccagtacagcaggggagaaaactcttgccagcaactctggttaag
tctatggagttggtgatctttgatgaagcgctggcttacagttacccagacatccagatc
acagtcctggcctacatacagaatctgagtccagacaagtacaccctgtttgtggacacg
gccaagatatcccagtctgtccagaaatcatgtcagttcctgatgctttgtcaggaggag
gcctacaaaggaagcagtgagttgattgacatggcagaagcttcaatccagagcctgcct
taccacctccatcttccactggtgtcagaatttgtcaaactctcatcctccatttgtgcc
agaacttcccaagacaaggcccttcagaacaagtgtgtggaggtcctgctgaggtttctg
tctcatccactgcctgaggttaaagagcagacctacagcaccatcaaacaagttgtcaag
ggctccctcaatgtgaacgaggcagcagaccccagctctagagcctgctatctgtcccgc
tttctgttcagttccgacattatgtatgaaatcattgtgtttgggttgaatgactctaat
cccaaggtgagccagacagcctctgatgtcatctgccacatcctggacggtcagctgttg
atgacagaggatctatggaaggaggtcctcaatgctttgatgaggtcacttcctgtttta
gagacatatgttgatatggggacaaagcttggatccaccctcctgtcactgactgatcct
acagaggtccaggccgagggaggactagtgtacttagagaagctgaggggctgtctcaga
atgatgttttctacagatgtcagagcaagagctgaggccttgaagcggttggcttggttt
ctgtccaatgaacaaaacagcaatgagaagttgccaatatttgcctctttggacgtcaca
aacttaaccagcattttcattgtggacatgcagaggtctctagatgaagatttaggaaga
tctgtatttcagattgatggaatgagaaaggtatatgaaatctttagctcctcatccgtg
gacccctcagtgaagaagtcggcagtggaccagctggcaatcatcttacaggatcacaat
ctacacgccccgttcaaagcggaaggaggggtggaaactgtcctcaaacacctgaagctg
ggtctggtcagaaacgatgacgctcagagtgaatacatacactacctccctgcctgtgca
gctatcctgagacccctagttcactttgattacaaactgagacacagactcgctcgagat
caggaagtttatctcgtactacttagagttgctttcctgcaccagagagatgagagaaca
tgctatgaagttgctcatattctgatattattgctatttgatgaagtggccaagtttgat
cttggtggaggaacagttcctgttgttcatttctccatacccagtgtactgaggaaaagg
tgccgcctcccattccgcccagcttgtcaccatgacaacagtccccacacggtggaacta
cccctagatcctgaccctgtacagacagacagaccgctggaaatgctacgaatctcttgg
aacgtggcttggcatggagggatggaaaaactattgaaacatttggctcagagcaaaaat
agcagtcaaaaagacaagatgacagaattttctccaagattgcagctgagctttatagag
aggaaaatcgtacagtgtagtcatttagcagaggggataaagcagactctgtacagtgtg
tctaacgccacgtcccacaatgccgtgagtgcagcgctcggtcagctcctcagttatctc
gtcaactcttatggttatgaagggtcagaggtcatgttcggtcaagagtggctgtccagc
attggcaggtttctgaaggtacacccatcaatgcctgatgatgaatcactccttcaggag
gtccttcgattcatcagtatggccctgaggctgtcaggtgaggtgactgagggcaccttg
caggccctgggtgaggtcctatatcaaccatcgggacctctgattggcctgtctcatagg
acctcagttaggggggaaacccgagacgttcctgaaaatgtcaacatcaaaagaaccttg
gacaaagaactgctttcttttatctcgacctacaactgtaaacttccctatgtcctctgt
agaagacttaagttccaacagctgcgtggggacctctgtcatcagctgttacagcgcctc
aacgtaactgatgctcctcacttctacaacctggcctcattggagggaacactgcagtgt
cttatgcatgtcactgccagacctggttggagctctgagagtacagaacttgggggagag
gcactgtgtagtcagcttctggcctgtctcctcgaggttgtgtctgcctttcatattggc
cgaggagggacctcaatgtcatacatgggaaaaggtgtcactaaggcagccaccatgtgt
ctgaggcatttagcatatgaaatgtcaactactgcagaaaataagaaatgggccgagcag
tggatatatgtacagcagagggctgacggacagaacagtgcagaagtggaggaacaccag
ggcttggactggttattaactttgtggtcctaccgggatcctgaggtgagagtagctgga
cttggtattggagtggccttgaccttaacagagagtggacgaacagtgctgacctctcac
tgtgtccacattccgggcggagtctggggagtggcttttagtattcttctcgaccaatca
gaatgcagtatggtcagacagcaggcggctttactgttggtaaacatgacatcgcaaccg
atgccctgcggcagtgtcgagttagaggagaatgtgtggcagggaccggtggtagctgat
actgagtccaaggtgtctctggtcggattaactgccctcatggccttgctacaccacagc
catttctaccaggaaatgcttgtcgtgttcactaacttctatgctcagccgaccattcag
caaatctctgccactgaattgatgatttcccctcatctgtcgtctgctagctcagaatcc
actatgtctacttcagctgatttgacatctgtgagtcagcagggtcaaccagtgtggagt
agaggtggtggagattcaagaggaaaaataaagactggcatcagaaatgtccaaacagga
gtggtacagcaggtagcggacagctctgggagcacactgatggcaggagagggaggaagt
gacatcatcagtgtagcaacaccctccttggtggcttccatatcacaacttttacgcaat
ctggtggttatagcacctgcagacacattcacttgtttgaagcgggactcttttgtgcag
atccttatgaacatggtggacactaacctactggaagcctatatgcttgagatggaggga
cacgtgagctacgaccagtacgagattgtctttggtgacctcctggagatgtatgcgtca
gtgatgtcactgcttacggcctgcgtcgtgtatgacacgcccaccagacaggacatcctc
gctaacaaggacttcatcatgtctgccctggctctgatgaccatcagattccaaggttcc
tgtgatgtggagtctaagctacaggaactgtggggaactgttctgtttttttttgtcaca
aacctacaacttcaaggggcatcaactctagcagtggtgacagagtgtttgcccaaaata
tggacctctttctcagacaacctgtgtaacatcttgacaaggaggctggactacggccat
gatctgttctctaagtgtctacagttcctgtctgcactgttcagtgaagaaggcaaactt
caggggagacaactagatctctccaacagcaccatcacagatctcctggactccgacttt
ggtaaagaggataaagaagagactagcgctggttgtcacctgtgtaaggccctggtgccg
gtgtatgagcaggcggtgatacggaccactgatcacaagaacacggacagactccattca
gcagccgctctacggaacctcctggcagtaagccaaaaggccaagggcactgctctgcag
atgggctttgtagaaaccacaatagaaaatatcaaacagttgcattccaagataaatatg
gaagccttacagctgggtaagactgcggcaaagaagaaggaagacgccctggtgccagat
ctcatcatcaccctggatgtgctcaggaacctcctctttatgaacgaagatgcaaagatg
gcatgctaccattctggactgccaactgtcatccacaagatatggccgtggtgtcaaatg
gaacctcagttaatgctctcaactgtctcattattgtccacttatgcagccaaatgtttg
acagccaccagttctttggcttacacctcaccttcttcaacatccaccacacaaaatgct
agatcttcgtcccagcagttgggggctaactccttggtccactgcttgctgaagctggcc
ggcagagacaacatcaaggagccactactgaaagctctgtatggactgttggctaccctg
gcactgtcctcagagtgcagaaatatcatgtttaaaagtaatttctttagagagtttttg
gagttgaatcccagaaagacaaagaagagtaaacaggtgaagaagatggaggtgtactgg
ctggagctgatgcttaacctgtccttctccacggagggccagcagatgatcctcaaaaca
ggagactcggtggacctgttgctggactttgtggactgtgggaatggacctggcctggag
tactctgtactgatcatcaggaacatgtgctgtcactgcagcagtaaaccaaagctcctt
gccaatgacaaactacttcctcttctgctgtcatgtctggacaaggattttgggaaggtc
cagacaattgctgcatcagcactcctggggctagtctttaacaaccaaaaggccaaagtt
atgatgaagaacgccaacttgctgccaaaactgcaagaaatcttgtccaacctgaacaat
ctccaatcaacaccagaaaaatgtgtgcaagatttgacgtctgtgttaataacggtgtca
gaatga
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