Magallana angulata (Portugese oyster): 128187326
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Entry
128187326 CDS
T09348
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128187326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128187326
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128187326
mRNA degradation factors
5'-3' decay
Decapping complex
128187326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
CA109-like
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
128187326
NCBI-ProteinID:
XP_052713686
LinkDB
All DBs
Position
6:26143149..26157150
Genome browser
AA seq
1396 aa
AA seq
DB search
MDHGDSPASSLQSTGDTGQLLQELLNLQKSNVLSTGSLNIPQGTTLHHITESTEVPGSGD
GTNPTLAELMMTMYDNPVPRQLITLQGSDTANSFSVYGREVEIITSKPNEAASSQAKTGS
NKVKTTPVVKFEWEPVYYIGNLVTLHRLNVYAAYSLRGKSGGVVRIINRKTAERALLKDL
TGKVVDIAFAYTDDVILAAVDEVGNLLVHSVREGDDKKIQVQLLLKITRPRGTIPTEYHR
VIWCPFIPDDCDDSSVTESSTQDASRVLVLTHGEKSEIWNVDMVTREHGSGPLSVDDVEF
GLIRIDSHTKAVMDAAFSPDGTALATASLDGEVKFFQVNMSESTSPRCLHQWKPHDGKPL
SSLFFLDDHRNSSADTQFWRFAVTGACNNQEIKIWSCESWVCLQTLRFMCPPDLPTNFSA
EPCMKAGLDLSAKYLVLSDIKRQVLYVLQIHQDSAANTAHVSSVSEFLLAQTCLSFAILD
ASKKKFKKVTEESHMDDITTGELDREEGGEDSEHKQEVPTASGIQIKLYTVHPKALQELL
IRFRPESTAPPAATPSVSTISHDDTGLQDALSDMSFSLDSSRIDNNTSLQQEQPVLLTPE
AFSTTSPRKDLSSTDPVRASGSSTSSLTQVTGLNEEMFSPHSSGDQSVLSEGSTITQTPT
EKEDPSSGRYSHDLTPTKLPPTGESLTSIAEITTEDKPSALQKVCVDDLFDSTRQSLGQT
LNSTDSSTRQSIENTSSTTGFEVGQLGAQKLSTMKESYDENDEEVAEVLGESYKEEVEEE
EEVEESLEDGPQSTQPFEEHSGDMESDPMPTSWPKPPDVRTETQEMEDIQNEEVYTEDDD
VQVEEEEEESKAENYDKDEEAGNDMDNLQEGSSEEIEEQIEEASEELQSPKEAPVAIPVA
KAREIIKEIHTREVIRENVDKDAINALNENIQSILAVLEAQNSKIESLQYQLVEQQEFHR
QQVESDAVPQQPQNIEEHLGKLEGIVTSRVERMFTQHTQKENQRVRELIQQSEQRDKQRQ
DRLQQILIQTMNNAVASNMEKQVRQEMANTILPSVTRILEPVKEQMHQEIAQKLTATDSI
IRDSIGKMVRSKQTIEALGVAAGNVLQTPIQLAYREAFQNIVVPSFDRAMQNIFQQVNET
FVKGTKETTRHLDTHLNEIREKHVEARDPIIAQLRKLTDSFQSSADSIQQQVLSTLQSRI
NAEIQSALSNLEETIVRYVRQAVKEEVSIAVREQGASISDSVLLAMRSGAVTPVQVTPDP
HQVQTQILNLLRQGQLNTAFQQALSASNLDLVVFVCETVNPSQVFNQSPCPLQQPVLLSL
IQQLSADIGNNTELKHKYLEEAVMNLDTSNPVTQGHMRGVLIGLIQKLKTYITAHPNDKT
TRSLRMLQMASESLLK
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggatcacggggatagcccagcgtcatcccttcaatcaaccggcgacacaggccagctc
ttgcaggaattgttgaacctccaaaaatcaaacgttctttctactggaagtttgaatatt
ccacaaggaactactttgcatcacattacagagagcactgaggtccctgggtcaggtgat
ggaacaaatccaacattggcagaattgatgatgactatgtatgataacccagtgcccaga
cagctgatcaccctccagggaagtgatacagccaacagctttagtgtttatggaagagag
gtagaaataatcacaagtaaaccgaatgaagcagcaagttctcaagccaaaactggaagt
aataaggtgaaaactaccccagtagtgaaatttgagtgggaaccagtgtattatattgga
aatttggtaactctgcacagactgaatgtctatgctgcatattcactgagaggtaaatct
ggaggtgtggttcgaatcatcaataggaagacagcggagcgggcgttattgaaggacctg
acggggaaagtggtagacatagcattcgcttacacagatgatgtaattctggcagctgtg
gatgaagtaggaaatctactggttcacagtgtcagagagggagacgacaaaaaaatccaa
gtacaactgctcctgaagattacccgtcccaggggaaccattcctacggagtaccaccgt
gtcatctggtgtcccttcatcccagacgactgtgatgatagctccgtgacagagtcctcc
acacaggacgcctccagggtcctggtcctcactcatggagaaaagtcagagatctggaat
gtggacatggtgacgagggagcatggcagtggacccctgtctgtggatgatgtggagttt
gggctgatcagaatcgacagccacaccaaggctgtgatggatgctgctttctccccggat
ggcacagctttggccacggccagtctggacggagaagtcaagttcttccaggtcaacatg
agcgagagcacctccccaagatgcctacaccagtggaagccccatgatgggaaaccgtta
tcctccttgttcttcctggatgatcacaggaattctagtgcagatactcagttctggagg
tttgctgtgaccggtgcctgtaacaatcaggaaatcaaaatctggagctgtgagtcttgg
gtgtgtctccaaaccttaaggttcatgtgtcctccagatctccccacaaacttcagtgca
gaaccctgcatgaaagctggattggatttgagtgctaagtacctagtgctttctgacatt
aaaagacaggtgctgtatgttttacaaattcaccaagattcagcagcaaacactgcccat
gtgagctctgtgtctgagttcctgctggctcagacttgcctgagctttgccattctagac
gccagcaagaaaaagttcaaaaaggtcacggaagagtctcatatggatgatattacaact
ggtgagttggacagggaggaaggaggagaggactcggaacacaaacaggaagtgcccacg
gcctcagggatacagatcaagctctacactgtccaccccaaagccctgcaggagttgctg
atacgattccgtcccgagtccacagctccccccgcggccaccccatcagtgagcaccatc
tcacatgatgacacaggactccaggatgccttgtctgacatgagctttagtctggacagc
agtcggatagacaacaacacatctctacagcaggaacagcccgtcctactcacccccgaa
gctttctctaccaccagtccaagaaaagatctgtcctccactgatcctgtaagagccagt
ggatcaagcaccagtagcctcacccaagtcacaggactgaatgaagaaatgttctccccc
cacagctctggggatcagtcagtcttgtctgagggtagtacgattacccagaccccaaca
gagaaggaggacccctcatctggaagatactcacacgatctgactccaaccaaactcccc
ccgactggagaaagtctgactagtatagccgaaatcaccacagaggataagccctctgct
ttacagaaagtgtgtgtggacgatttgtttgatagcactcgacagagcttgggacagact
ctgaacagtactgactcatcaaccaggcaatccatagaaaacactagcagcaccacaggg
ttcgaggtaggtcagttgggagcacagaaattgtccacaatgaaggagtcatatgatgaa
aatgacgaggaagtggctgaagttttaggggagtcctacaaagaagaggttgaggaggag
gaggaagtagaagaaagcttggaggatggcccacaaagcacacagccctttgaggaacac
agtggtgacatggaatcagatccaatgcccacctcctggcctaagccacctgatgtcaga
actgagactcaggagatggaggacatacagaatgaagaagtttacaccgaagatgacgat
gttcaagtggaagaagaggaagaagaatccaaggcagagaactatgacaaagatgaagag
gcaggcaatgatatggataacttacaggaaggaagtagtgaagagattgaggaacaaata
gaggaagcaagtgaagaattacagagtcccaaagaagcaccagttgctattccagttgcc
aaagctagggaaatcatcaaagagattcacaccagagaagttataagagaaaatgtggac
aaagatgccattaatgctctgaatgagaacatccagagtatattggcggtgctggaggcc
cagaactccaagatcgagtccctacagtaccagctagtcgagcaacaggagtttcaccga
cagcaggtagagagcgacgcggtacctcaacagcctcagaacatagaggaacacctgggc
aaactggagggcattgtcacctcacgggtcgagagaatgttcacacagcacacacagaaa
gagaatcaaagagttagggaactaatacagcagtcggagcagagagataaacagaggcag
gacagactgcagcagatcttgatacagaccatgaacaatgcggtggccagtaacatggag
aaacaagtgcgtcaggagatggccaataccatcctccctagtgttacaaggatattggag
cctgtgaaggaacagatgcaccaggaaatcgcccagaaattgacagctactgactccatt
atcagggacagcatagggaagatggtcaggtccaagcaaacaatagaagctttgggagtt
gctgctggaaatgtgttacagaccccaatacagctggcctatcgggaagccttccagaac
attgttgtgcccagttttgacagagccatgcagaacatcttccaacaagtcaatgagact
tttgtgaaaggaacaaaagaaaccaccagacatctagacactcatttgaatgagatccgt
gagaagcatgtggaagcgcgtgacccaatcattgcccagctgcgtaaactgacggacagc
ttccagtcctcggcagactccatacagcagcaggtcctgtccacactacagagcagaatc
aacgcagaaatccagtccgctctctccaatcttgaggagacaatagtgcggtacgtcaga
caggcggtaaaggaagaggtcagtatagcagtcagagagcagggtgccagcatcagtgac
agcgtcctactggccatgagatcaggggcagtaactcctgtccaagtcacccccgacccc
catcaagtccaaactcaaatcctgaatctcctcagacagggccagcttaatacagcattc
cagcaggcactgtcagcatccaatctggacctggttgtgtttgtgtgtgagacagtcaat
ccttcccaggtgttcaatcaaagtccttgccccctacaacagccagttcttctgtctctc
atccaacagctgtcagctgacataggaaacaacacagaactcaaacataagtatttggag
gaagctgtgatgaatttggacacctcaaaccctgtaacccagggtcacatgaggggagtt
ttaattggacttatccagaaactgaagacctacataaccgcccaccccaacgacaagaca
acgcggtccttacgcatgttacaaatggcttctgaatcattgctcaaatga
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integrated database retrieval system
