Magallana angulata (Portugese oyster): 128187338
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Entry
128187338 CDS
T09348
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128187338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128187338
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
128187338
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
128187338
NCBI-ProteinID:
XP_052713708
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Position
6:44893970..44913352
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AA seq
226 aa
AA seq
DB search
MTTHGRTSGWPKGTNPVSYAAKYGITNPSPTLDRPINLYPLTNYTFGTKEPLYEKDSSVP
ARFQRMRDEFEKIGMRRSVEGVLIVHEHGLPHVLLLQLGTTFFKLPGGELNSGEDQVEGL
KRLLTETLGRQDGGTMEWVVEDTIGNWWRPNFEPPQYPYIPAHITKPKEHKRLFLVQLPE
KALFAVPRNYKLVAAPLFELYDNSAGYGPIISSLPQALSRFNFIYN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacacggcagaactagtggctggccaaaaggaacaaatccagtgtcttatgca
gctaaatatggcataacgaacccttcacctacgttagatcgcccgatcaatctgtaccca
ttaacaaattacacatttggaaccaaagagccattgtatgagaaggatagctcagtccca
gcacggtttcagcgtatgcgagatgagtttgagaagattggaatgaggcgatctgttgag
ggagtgttaattgtacacgagcacggacttccccacgttctccttctacaactagggacc
acatttttcaaattacctgggggagagttgaattcaggcgaggatcaagtagaaggcttg
aaaagattattaacagagaccctgggaagacaagatggtgggactatggagtgggtagtg
gaggatactatagggaactggtggagaccaaactttgaacccccacagtacccttacatc
ccagcacacatcacaaaacccaaggaacacaaaagacttttccttgtacagctaccagaa
aaggcattgtttgctgttcctagaaattataaacttgtggccgcccccttgtttgaacta
tatgacaacagtgcaggatatgggccaatcatctcaagtttacctcaagctctaagtcgg
ttcaacttcatatacaattga
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