Magallana angulata (Portugese oyster): 128187541
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Entry
128187541 CDS
T09348
Name
(RefSeq) uncharacterized protein LOC128187541
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128187541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128187541
03400 DNA repair and recombination proteins [BR:
canu03400
]
128187541
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128187541
Messenger RNA biogenesis [BR:
canu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
128187541
DNA repair and recombination proteins [BR:
canu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
128187541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128187541
NCBI-ProteinID:
XP_052713921
LinkDB
All DBs
Position
6:45476360..45478516
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AA seq
455 aa
AA seq
DB search
MAAPIENNIEADICKRFKIPALRPNQKKAIYAVSDRKDVFVGTKTGSGKSLTYECIPILF
TGACVIIITPLISIMSEQCKKLTALGFKATYIGKDSAETNDIINGEYDFIYASPEQLVGD
LKWRDVLKSDIYQRKLRAIVVDEAHTVIQWGDSQDKKTEPFREWFFRIGELRSLCSSAQM
VALTATAGPSNRRKILNQLSFSSNAEIVVESPDRLNIKISSKCIPNNDKIENVFAWLISD
LRALKEKMSRHVIFCKAISDVSKLYVAFVKIFGANCELINMYHSKTNEKLKEKIRADMAV
DGKIRILICTNSAGMGVNFFGLNNIVHYGLPREMDTFVQQMGRCGRDGMLSNELILFKNH
KGHLKKVECDLVKLAKDNNECRRNNLCKAYAMKKADIIPIHNCCDVCEKKCSCDDDTCPN
THKVNQETEQEEEAEEEMSREVSEEDGKFLKQNKT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccatagaaaataatattgaagcagatatttgcaaaagatttaagattcct
gctctcagacctaatcaaaagaaagctatttatgctgtcagtgatagaaaagatgttttc
gtcggaacgaaaacaggcagtggaaaatctctgacctacgagtgcattccaatacttttt
accggagcgtgtgtcattataataacgccgctaatttctataatgtctgaacaatgtaaa
aaattgactgctttgggtttcaaagcgacctacataggaaaagactcagctgaaacgaat
gacataataaatggggagtatgactttatttatgcaagtcccgaacagctggttggtgat
ttgaaatggcgagatgtcctgaaatctgatatctaccagcgaaagctaagagcaattgta
gtcgatgaagcacacacagtcatacaatggggagactctcaagacaagaaaacagagcca
tttagagaatggttttttagaattggggaacttcgttcactgtgttccagcgctcaaatg
gtggcacttacagcaacagcaggcccaagcaacagaagaaaaatattaaatcaattaagc
ttttcttccaatgcagaaattgttgttgaatctcctgacagattgaatataaaaatatca
tccaaatgtattcctaataatgacaaaatcgagaatgtgtttgcatggttaatttctgac
ttgagagcactaaaagaaaagatgtcacgtcatgttatattttgcaaggctatatctgat
gtttcaaaactgtacgttgcttttgttaaaatatttggtgcaaactgtgaattgattaac
atgtatcatagtaaaactaatgaaaagttaaaagaaaaaatcagagccgacatggctgtg
gatgggaaaattcgaattcttatctgtactaattctgctgggatgggcgtaaattttttt
ggcctgaataatattgttcattatggattgcccagagaaatggacacttttgtgcaacaa
atggggcgatgtggtagagatggcatgctgtcaaatgaactcatactattcaaaaaccac
aagggacacttaaagaaggttgaatgtgatctcgtaaaattggcaaaagacaacaatgaa
tgcaggcgaaacaatttgtgcaaagcatacgcgatgaaaaaagctgatatcattcccatt
cataattgctgtgatgtctgcgagaagaagtgtagttgtgatgatgacacttgtcccaac
acccacaaagttaaccaagagacagaacaggaagaggaagcagaggaagaaatgagtcga
gaggtgtctgaagaagacggaaaatttctcaaacaaaataagacatga
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