Magallana angulata (Portugese oyster): 128187686
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Entry
128187686 CDS
T09348
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03020
RNA polymerase
canu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128187686
09124 Replication and repair
03420 Nucleotide excision repair
128187686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
canu03021
]
128187686
03400 DNA repair and recombination proteins [BR:
canu03400
]
128187686
Transcription machinery [BR:
canu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
128187686
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
128187686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
tRNA-synt_1g
Motif
Other DBs
NCBI-GeneID:
128187686
NCBI-ProteinID:
XP_052714077
LinkDB
All DBs
Position
6:complement(32092317..32098144)
Genome browser
AA seq
273 aa
AA seq
DB search
MPYANQPTVQITQLSEENIKFVLEDTDLSVANAIRRVCIAEVPTVAIDWVQIESNSTVLF
DEFIAHRIGLIPLTSDEVVDRMQYSRDCTCEEFCPECSVEFTMDVKCTEDQTKHVTSADL
ISSNPKVLPVTSKNKEETSEYEDTDDILIVKLRKGQELKVRAFARKGFAKEHAKWNPTCG
VAFEYDPDNSLRHTLYPKPEEWPKSEYSELEEDVHEAPFDGLGQPNKYFFNAESCGSLKP
ENIMFSALAVLKKKLSDLQTQLSHEIQQDVLAV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgcgaatcaaccaacggtacaaattacacaactctcggaggaaaacataaag
ttcgttcttgaagacacggatttaagtgtcgccaatgcaataagaagagtatgtatagca
gaggtacctacagttgcaattgactgggttcagattgagtcaaattccacagttttgttt
gatgagttcattgcacacaggataggccttattccactgaccagtgatgaagtggtggac
cgcatgcaatattccagggattgtacttgtgaggagttttgtccagagtgctcagttgag
tttacaatggacgtaaagtgtacggaggaccaaaccaaacacgtgaccagtgccgacttg
atttcatccaatccaaaagtattgccagtgacatccaaaaacaaagaggagacaagtgaa
tatgaagatactgatgatattttgattgtgaaactcagaaaaggacaagagttaaaagtt
cgagcttttgctaggaagggtttcgcaaaagagcatgctaaatggaacccaacatgtgga
gtggcttttgagtacgaccctgacaattcattgcgacacaccctgtacccaaaaccagaa
gaatggcccaaaagtgaatattcagagctagaggaggatgtccatgaagcaccgtttgac
ggactaggacaacctaacaagtacttcttcaatgcggagtcctgtggttcactgaagccg
gaaaacatcatgttctcagccctagctgtgctcaaaaagaaactcagtgacttacagact
caactcagccatgagatccaacaagacgtgttggctgtttga
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