Magallana angulata (Portugese oyster): 128188252
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Entry
128188252 CDS
T09348
Name
(RefSeq) RNA-binding protein 8A-like
KO
K12876
RNA-binding protein 8A
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03013
Nucleocytoplasmic transport
canu03015
mRNA surveillance pathway
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128188252
09122 Translation
03013 Nucleocytoplasmic transport
128188252
03015 mRNA surveillance pathway
128188252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128188252
03041 Spliceosome [BR:
canu03041
]
128188252
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128188252
Spliceosome [BR:
canu03041
]
Complex C
Other components
EJC/TREX
128188252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
128188252
NCBI-ProteinID:
XP_052715160
LinkDB
All DBs
Position
6:16159660..16162658
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AA seq
165 aa
AA seq
DB search
MADVLDLQEGGDEFEVDEEGDQGLLKLKEKAKKRKGRGFGADGSTRSGVEDYEAMDVDEE
GGPGPQRSVEGWILFVTGVHEEAQEDDVHDKFADYGTIKNLHLNLDRRTGFLKGYALVEY
ETFKEAQAAMDALNGSEILGQKINVDWCFVRGPRKGRGRKDGRRR
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtgttagatttacaagagggtggggatgaatttgaagtagatgaagaggga
gatcagggtttattgaagttaaaagagaaggctaaaaagaggaaaggaagaggctttgga
gcagatggatcaacacgcagtggtgtagaagactatgaagccatggatgtggatgaggag
gggggacctggacctcagagatctgttgaaggatggatcctgtttgtgaccggtgtacat
gaagaggcacaggaggatgacgttcatgataaatttgcagattatggcacgataaaaaac
cttcaccttaatctggacagacgtacaggttttctcaagggttatgcattagtggagtat
gaaactttcaaagaagcacaggcagcaatggatgcattaaatggatcagaaatcctaggc
cagaaaatcaatgtggactggtgttttgtgcggggcccaaggaaaggaaggggaagaaaa
gatgggaggaggcggtga
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integrated database retrieval system
