Magallana angulata (Portugese oyster): 128188395
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Entry
128188395 CDS
T09348
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04120
Ubiquitin mediated proteolysis
canu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128188395
04120 Ubiquitin mediated proteolysis
128188395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128188395
Enzymes [BR:
canu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128188395
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
U-box type E3
128188395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
MoaF_like
Lipid_DES
SNaCT8
Motif
Other DBs
NCBI-GeneID:
128188395
NCBI-ProteinID:
XP_052715375
LinkDB
All DBs
Position
6:18698819..18717418
Genome browser
AA seq
1107 aa
AA seq
DB search
MSELTPDEIRRRRLARLAGNASSSSQSDGSPSLSQASGASSQASDSQSTMSRTNSTPPSS
LNVDPITPESQRSLDMDSECSEKNSQSQMDVDSGIETMEVDDSDMKFEIKRRRDTSIGSE
ATVEQVTEAVGRVCLVSWKEETQDAVYIPELADCEAEDDCKEMINQSLMEMLLKIRDCPE
NPVLKIRPNFSYAVSPKKPGSSPRSVGTMMSPDMQPKREFSAKYQPENCKEVEMISYLMD
CYDRAGLEERLAPKRASVPPLSLMLSSARHQCVCHTAIVLQGGLTTPRSVGGNSLLLSYL
LSHNLPRGFLPELVQTTCDDRDTFRRVFIPVLQGLNRYIHGMSLDSDDYRDPLSVLSELC
EIKSGNSRPICGLAVELVNWIPVTLTKATGMELEKLSWLGPFLGLSVFAEDNTKVVEKFF
SGHQLSADSTKLIHQSLQHGMGYARAELFKILHTILVNGQSRDLALSYIAKALERNAKKS
QIQVDERYVAGDGFMLNLLSVLQQLSVKITLDKVDTYYPFHPNSRVGIKSETRLKALPQH
AEKWIKELSKETPPWQDPKFPTECFFLTLHCHHLSIIPAVRRYQRRLRAIRDLNRMVEDL
ENTESQWSQFPHAARNKEMLKKWKSQVQRLQKSKLCADAAILDESLLRHCLNFYSGVSTY
ILKVADPQNMGQTLPLPKNVPMPFGALPDFYLEDIADYLLFVIQFSPDVLNDPCMTQIIH
MLIVMVCNNEYIGNPYLTAKLVEVVFVMNPSVQRRTGSLNEQFLLHPLALKHLVPALMKF
YTEIETTGASNEFYDKFSIRYHLSIIFKTMWQTPQHQLNMIEEADNGKQFVKFVNMLMND
TTFLLDESLDCLKRIHEIQEAMQNMEEWERQPKDQQQSRQRQLAMDERQCRSYLTLATET
VDMFQYLTEKIRKPFLKPELADRLAAMLNFNLRQLCGPKCKNLKVKNPEKYGWEPKELLN
RLTDIYLHLDCDQFATAIANDERSYRHELFNDAIARMQKAMIKTNVEIEKFRFLQEKVDK
IVLEKQQEEVDYGEIPEEFKDPLMDTLMNDPVILPSGTVMDRPIITRHLLNSQTDPFNRQ
PLTEEELKPANEIKLKIEAWKQSKTRR
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattaactccagacgagatccggcgtcgaagacttgccagattggctggtaat
gcatcctctagttcacagagcgacggatctccaagtctgtcccaggccagtggggcatcc
agccaggcctctgactcccaatccacaatgtcaagaactaacagcacacctcctagcagt
cttaatgtggatcctatcaccccagaatctcagaggagcctggacatggattccgagtgt
tcagaaaagaactcacaatcacaaatggatgtagattctggaatagaaacaatggaagtt
gatgactcagatatgaagtttgagatcaaaagaagaagggataccagtattggatcagaa
gccactgtagaacaggttactgaggccgtgggtcgagtgtgtttggtgtcttggaaagaa
gagactcaagatgctgtgtacatacctgaacttgcagattgtgaggctgaagatgactgt
aaggagatgattaatcaatccttgatggaaatgctgttgaaaatcagagattgcccagag
aatccagtgttaaaaattcgacccaatttctcttatgctgtatccccaaagaaaccaggg
tcaagcccaagaagtgttggcacaatgatgtcaccagatatgcagccaaagagagagttt
tctgccaagtaccagccagaaaactgtaaggaggtggagatgatcagctatctgatggac
tgttacgatagggccgggctggaggagaggctggctccaaagagagcaagtgtccctcca
ttgagtctgatgttgtccagtgctagacatcagtgtgtgtgtcatactgcaatagttctg
cagggaggactcaccacacccagatctgttgggggcaactctctactgctttcctatcta
ttgtctcataacttacctcgcggctttctccctgagcttgtgcaaaccacatgtgatgac
agggacacatttagaagggtgtttatcccagtcctacagggcttaaacagatatatccat
ggcatgtccttggacagtgacgactacagagaccctctgtctgtcctgtccgagctttgt
gaaatcaagagtggcaactcgcgacctatatgtggcctggctgtagagctggtaaactgg
atcccggtcactctcaccaaggccacaggaatggagttagagaagctgtcctggctcggg
ccattcctggggctctctgtttttgcagaggataataccaaagtagtggagaagtttttc
tcgggccaccagttgtcggctgacagcaccaagctgattcaccagtctctgcagcatggc
atggggtacgcccgggccgagctgttcaaaatcctgcacactattctagtcaatggacag
agccgcgacctggcattatcttacatagccaaagctctggagaggaacgccaagaaatcc
cagatacaggtggatgagagatatgtagcaggagatggattcatgttgaacttactgtcc
gtccttcaacagctgtctgtgaaaatcacgctggacaaggttgacacatactacccattc
catccaaattctcgagtgggcattaagtcagagacacgcctgaaggcccttcctcaacat
gcagagaaatggatcaaggaattatctaaagaaacacccccctggcaggaccccaaattt
cccactgaatgtttcttcctgaccctccattgtcaccacctgtcaatcattcctgctgtt
cggcggtaccagcgccgtcttcgtgcaatacgtgatctcaacagaatggtggaggaccta
gagaacacagagtcccagtggagccagttcccacacgccgcacggaacaaggagatgctc
aagaaatggaaatctcaagttcagaggttgcagaagagtaaactctgtgctgatgcagct
attttggacgagtccttgcttagacactgtctaaatttttacagtggtgtgtctacgtat
attcttaaagttgcagaccctcagaatatgggtcaaactctgcccttgcccaagaatgtg
ccaatgccatttggagctcttcctgacttctatctagaagacatcgctgattatctcctg
tttgttattcagttcagccctgacgtgttgaatgacccctgtatgacccagatcatccac
atgctgatagtgatggtgtgtaacaatgaatacatcggcaacccgtacctgaccgcaaag
ctggtcgaggtcgtatttgtcatgaaccctagcgtccaacgcagaaccgggagtctcaat
gagcagttcttactgcaccctctagccctcaaacacttggtgccggctctgatgaagttt
tacacagagattgaaaccacaggagccagcaatgagttttatgacaagttctccatccgc
taccatctcagtatcatcttcaagaccatgtggcagaccccacagcatcagctcaacatg
atagaggaggcagacaatggcaaacagtttgtgaagtttgtgaacatgctgatgaatgac
acaaccttcctgttggatgagagtctggactgtcttaagcggatccatgagatccaggaa
gccatgcagaacatggaggaatgggagcgacagcccaaggaccagcagcagtcccgacag
aggcagcttgctatggatgagcgacagtgcagatcttacctcacactagccacagagact
gtggatatgttccaatacctcaccgagaaaatcaggaaacccttcctcaaaccagaattg
gctgatagattggcagccatgttgaatttcaatctgcgacaactgtgtggtccaaaatgt
aagaaccttaaagtgaagaacccggagaagtacggctgggaacccaaggagctgctcaac
agactgaccgacatctacctacacctggactgtgatcaattcgccactgctattgccaac
gatgaaagatcttaccgccatgaactttttaatgatgctattgccagaatgcagaaggct
atgatcaaaactaatgtagagatagaaaaattccgctttctgcaggaaaaagttgacaaa
attgtcttagaaaaacagcaggaagaagtggattatggggaaattccagaggagttcaaa
gatcccttgatggacactttgatgaatgacccagttattttgcccagtggcactgtgatg
gatcgaccaatcatcactcggcatttattgaactctcagactgacccattcaataggcag
ccgctcacagaggaggaactcaaaccagccaatgagatcaagttgaagatagaggcctgg
aaacaatcaaagacaagaagataa
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