Magallana angulata (Portugese oyster): 128188883
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Entry
128188883 CDS
T09348
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128188883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128188883
Membrane trafficking [BR:
canu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
128188883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
TRF
FerA
Motif
Other DBs
NCBI-GeneID:
128188883
NCBI-ProteinID:
XP_052716152
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All DBs
Position
6:42091249..42100811
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AA seq
802 aa
AA seq
DB search
MPSTPQLSPQEEQEKLLEEGISIVKNQSFQMKRCLDKGKLMDGLKHASTMLGELRTSLLS
PKSYYELYMAISDELRHLELYLCDEFQKGRKVADLYELVQYAGNIVPRLYLLITVGVVYI
KSNELSRKDILKDLVEMCRGVQHPLRGLFLRNYLLTCTKNVLPDTEEELATNDYEYGTVM
DSIDFILLNFSEMNKLWVRMQHQGHTRDRNKREQERRELRILVGTNLVRLSQLECIDMEK
YKKVVLPAVLEQVVSCRDPIAQEYLMECIIQVFPDDFHLQTLNPFLKACAELHESVNVKN
IIIALVDRLAQFAQNEEGSGIPPEIQLFDIFSDQISQVIQNRPDMPPEDIVALQVALINL
ALKCYPDKVDFVDKVLETTEDIFNRLNLDHSSCSLEYGSPVSKELMRLMKIPVDSYNNIL
TVLELSHFGPIFDYFDYQSRKLMCSYLINNVLENDTRIPTQDQVDNILNIVNVLVQDQSD
QPAEPDDPEDFAEEQVLMGRFIHLLQAEDPNQQYLILNTARKHFGGGGDKRIKFTLPPIV
FAAYRLAMRYKEAKEEDENWEKKCQKIFQFCHQTVGALIKADMAEMPLRLFLQGALTAGE
IEFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTLEQMSCFGDENHEPLRTQC
ALAASKLLKKPDQCRGVCTCSHLFWSGRSASQEGELQDSKRVSDCLKKGVKIANQCMDSS
VQVQLFVELLNHYIYYYEKGNDQVTIQVLNQLIAKIKETLPNLEANEETEQINKHFQNTV
EHLKLRRDGSETEGPSYEELVL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgccttccacccctcagttatccccccaggaggagcaggagaagttgttggaggaggga
atcagtatagtcaagaaccagtccttccagatgaagagatgcctggacaaaggaaaacta
atggatggtttaaagcatgcatcaacaatgctaggagaactgagaacatcactcctgtcc
ccaaagagctactatgaattgtatatggctatttctgatgaattgaggcatttggaactg
tacctctgtgatgaatttcaaaaaggaaggaaagttgctgacctctatgaacttgttcag
tatgcaggaaacatagttcccaggctttacctgttaattactgtgggagttgtctacatc
aaatcaaacgaactctcacggaaagacatcctgaaagacttggtggagatgtgtcgagga
gtgcagcaccccttaaggggcctctttctgaggaattacctactgacctgtacaaagaat
gttctgcccgacactgaggaggagctagccacaaacgactacgagtatggaacagtaatg
gattccattgactttatcttgctgaacttctccgagatgaacaaactctgggtcagaatg
cagcatcaaggtcacactcgagatcgtaataagcgagagcaggagagacgggaactcagg
atcttggtcggaactaatcttgttcggcttagtcagctggaatgtattgacatggaaaag
tacaaaaaggtggttttgccggctgtgttagaacaagtggtttcctgtagagaccccata
gcccaggaatacctgatggagtgtatcatccaggttttcccagatgattttcatctacag
accctgaatcctttcctcaaagcgtgtgccgaacttcatgaaagtgtcaatgtgaagaat
attattatagctctggtggacagacttgcacagtttgcacagaatgaagaaggatcaggg
attcccccagagatccagctgtttgatattttttcagaccagatatctcaagtgattcag
aatcgcccagacatgcccccagaggatatagtggccctgcaggtggcgctgataaatctg
gcgttgaaatgttacccagacaaagtagattttgtggacaaagtgttggaaactacagag
gacatcttcaacaggctgaatctggaccactcttcttgcagcctggaatacggcagtccc
gtgtcgaaggagctgatgcggctgatgaagattccggttgactcgtacaacaacattctt
accgtgctggagctgtcacactttggtcccatctttgactactttgactaccagagcaga
aaactcatgtgttcctatctcatcaacaatgtgttggaaaacgatacccgtataccaact
caagatcaggtggataacattttgaacatcgtgaacgtccttgtacaagaccaaagtgac
cagccagcagaacccgatgacccggaggacttcgctgaggagcaggtgctcatgggaagg
tttatccacctactccaagcggaggatccaaaccaacaatatctgatattgaatacagcc
agaaaacattttgggggtggtggagacaaaagaattaagttcacgcttccccctattgtg
tttgctgcatacagactagcaatgagatacaaagaagccaaagaagaggatgaaaactgg
gagaagaaatgccagaagatattccagttctgccatcagacggtaggagctttgatcaag
gccgacatggcagagatgccacttcgacttttcctgcagggagcattgacagctggagaa
atcgaatttgaaaaccatgaaactgtagcctacgaattcatgtcacaggcattttcactc
tacgaagatgagatcagtgatagcaaagcccagcttgcagccattacgcttattatcggc
acgcttgaacaaatgagttgctttggagatgagaaccacgaacctcttcgaactcagtgt
gccctggctgcctccaaactcctcaagaaaccagaccaatgtcgaggagtctgcacatgc
tcacatctcttctggtcaggaaggtccgcatcacaggaaggggagctccaggatagtaaa
cgagtgtccgactgcttgaagaagggagtgaagatagctaaccagtgtatggacagttca
gtacaagtgcagttatttgtggaacttctcaatcactatatatactactatgagaaaggc
aacgatcaggttacgattcaagtcctcaaccaactgatagctaaaataaaagagactttg
cctaacttggaagcaaatgaagaaactgaacagatcaacaagcattttcagaatactgtc
gaacatttaaaactacgaagagacggtagtgaaactgagggaccttcgtatgaggaactt
gtgctttaa
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