Magallana angulata (Portugese oyster): 128189273
Help
Entry
128189273 CDS
T09348
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128189273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128189273
Membrane trafficking [BR:
canu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128189273
Protein recycling
Other Rab GTPase associated proteins
128189273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
AAA_15
CTD11
DUF6364
RED_N
M-HEAT_ATR
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
128189273
NCBI-ProteinID:
XP_052716786
LinkDB
All DBs
Position
6:8315867..8325050
Genome browser
AA seq
507 aa
AA seq
DB search
MSTNKKSAKKGSHHFHVDESDLLCKNGCGFYGNPAWQGFCSKCYREVYQAAKQAQAQHDE
QQHRPMGETEEASTPLFSKFTEKKSLQFNKRSHTVKSIFRKTPTKDSPIQENTPPRKEIK
RVSLETQQLGTEFADYLKSLRKNVAVDVSKHTKAIVDKLSQYADASVEELSEMIQDFYQN
MSDRMNSHNTYKGQSPEMSEKLLDYIEKYVMVRVYSMVFCQSNEDEQKDLQIQDRIRGLH
WVTAQQLDTPINDNEDEVRQLVDRAITEIIEMNSKKSPPDKLDCVTRCCKNIFEILRHSK
TGPANADDFLPALIFIVLKANPPLLQSNIQYITRFANPSRLMSGEAGYYFTNLCCAVSFI
EGINAESLNLTQQEYDRYMSGEAIPPQAGQDNTCEGLRIMWENLRTLSELRQRQEKVMAD
TLQLQQDMIEFKDSFRQEVQVVLEKNPWALRPRKMKIDIDADTENMTNLPTPLLPEPLMP
TKAQAVVGLGASEEAAPASSDVSGQET
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaacaagaaatctgccaagaagggcagccatcactttcatgttgatgagtcg
gaccttttgtgtaaaaatggctgtggtttctatggtaacccagcatggcaggggttttgt
tccaagtgttacagagaggtttaccaagcggctaagcaggcccaggctcagcatgatgaa
caacagcacaggccgatgggggagacagaagaggccagtacccccctcttctccaagttc
accgagaagaaatcgctgcagttcaacaaaagatctcacactgtcaaatccatattcagg
aaaactccaacaaaagattcccccattcaggaaaacacaccccctcgtaaagaaatcaaa
cgtgtcagcttggaaacccagcagcttggaacagagtttgccgactacctgaagtctctt
cgcaaaaacgtggctgttgatgtatccaagcacaccaaagccatagtggacaaactgagt
cagtatgcggacgcttcagtggaggaactgtccgagatgattcaggacttctaccagaac
atgtctgataggatgaattcacacaatacttacaaaggtcagagcccagagatgtcggag
aagctgttagactacatagagaagtatgtgatggtacgagtctactccatggtattctgt
cagagtaatgaggatgagcagaaggacctccagatccaggaccgtattcgtgggcttcac
tgggtcacagctcagcagttggatacacccatcaacgacaatgaggatgaagtacggcag
ctcgttgaccgtgccatcacagaaataatcgagatgaactcaaagaagtctcccccagac
aagttggactgtgtcacccgatgttgtaagaatatttttgaaatcctccgtcattccaaa
actggaccagcaaatgcagacgatttcctaccagcattaatcttcattgttctgaaggcc
aacccacctttgcttcagtcaaacattcagtacattacaaggtttgccaatccaagtcgg
ctgatgagtggagaagcaggatactacttcacaaacttgtgctgtgctgtatctttcatt
gagggaatcaatgcagagtctttaaatctgacacaacaggagtacgatcgctacatgtca
ggggaggccattcctccccaggccggacaagacaatacatgtgagggtctgcgcatcatg
tgggagaacctacgaactctgtccgagctccgacaacgacaggagaaagtgatggccgac
acgctgcagcttcagcaggacatgatcgagtttaaagacagtttcaggcaggaagtgcag
gttgttctagagaagaatccctgggcgttgaggccgcggaaaatgaaaatagacattgat
gcagatacagagaacatgacaaatcttcctacgccgcttcttccagagccactgatgcca
acaaaggcacaggcggtggttggactgggggccagtgaggaggcagctcccgcctcctct
gatgtctctggccaggagacataa
DBGET
integrated database retrieval system
