Magallana angulata (Portugese oyster): 128189551
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Entry
128189551 CDS
T09348
Name
(RefSeq) Y-box factor homolog
KO
K09276
Y-box-binding protein 1
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
canu03000
]
128189551
03019 Messenger RNA biogenesis [BR:
canu03019
]
128189551
03041 Spliceosome [BR:
canu03041
]
128189551
Transcription factors [BR:
canu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
128189551
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
128189551
mRNA cycle factors
Common to processing body (P body) and stress granule
128189551
Spliceosome [BR:
canu03041
]
Common components
Common spliceosomal components
General mRNP proteins
128189551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Motif
Other DBs
NCBI-GeneID:
128189551
NCBI-ProteinID:
XP_052717165
LinkDB
All DBs
Position
6:11528483..11533338
Genome browser
AA seq
307 aa
AA seq
DB search
MRHYGSPWGRPSLQRANKGIEWKSIYHRTINNIFLPSEAMSDSENQPEKEAEVEKKVIAN
KITGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIIKNNPKKYLRSVGDGEAVEFDVVEGE
KGNEAANVTGPEGAHVQGSKYAADRRRYRRYFPRRRGGGPGRPRSEGEEIDEEEETDEGK
RPPPRRPYYRGGGGRGFYRGFYQGGPRRPPRYQNAIMDGPGRQPQFRRPYWRRGYRRYYA
QGEGYEGPPQYGYRGGRGRGRGRGRGRGRGRGYFRRREDGERGRENESGESPEPTQEGNE
DRNEQQE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcggcattatggttcgccttgggggcggccatctttgcagagagcgaacaaagggata
gagtggaagtccatataccaccggacgataaataacatctttttaccatcagaggccatg
tccgactccgaaaaccaaccggagaaagaggccgaggttgaaaagaaggtcatagcaaac
aaaataacggggacggtgaagtggtttaacgttaaaagcggatatggcttcataaacaga
gatgacacaaaggaagatgtctttgtccatcagactgccatcatcaagaacaatcctaag
aagtacttgagaagtgttggggatggagaagccgtagaatttgatgtagttgagggggaa
aagggaaatgaagcagccaatgtcaccggacctgaaggggcccatgtccaaggcagtaag
tacgccgctgaccgcaggcgctaccgtcggtacttccccaggaggcgtgggggtggacca
ggccgtccaagaagcgagggagaagaaatcgatgaagaagaggaaacagatgaaggaaag
agaccccctcctcgtcgcccatactacaggggaggcggaggaagaggcttctacaggggc
ttctaccagggtgggcctcgaagacctcctcgctaccagaatgccatcatggacggacca
ggacgtcaacctcagttccgtaggccatactggaggagaggctaccgaagatattatgcc
cagggtgaaggctatgaaggtcccccacaatatggataccgtggggggcgtgggcgaggc
cgagggaggggcagaggtcgcggacgtggcagaggatacttcagaaggagggaggatgga
gagagaggcagagaaaatgagagtggtgaatctcctgaaccaacacaggaaggcaatgag
gacagaaacgagcaacaggaatag
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