Magallana angulata (Portugese oyster): 128189691
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Entry
128189691 CDS
T09348
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128189691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
canu03400
]
128189691
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
128189691
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
128189691
NCBI-ProteinID:
XP_052717363
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Position
6:21671214..21675737
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AA seq
915 aa
AA seq
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MDAFQDQGFISAFKSLPEKPSTTVRFFDRTDYYTVHGQDAVFVAKEVFKTVAVIKYLGAG
EKKLESVTVSKLNFESLVKELLLIRQYRVEILKNKTGSKNNEWMLAFKASPGNLTQFEDI
LFGNSDISQSVGVLGLKIGTENNERMVGVGFADVMMRKMLVAEFADNDQFSNLEALIVQM
GAKECVVWTGDLHTGKLRQVLERSNILITERKKSDFSSKDVVQDLNRLLKCKKGQQVNSA
TLSEMEKKIAMEAVSALIKYLELLSNEDYFGQFSIGSFDFSQYMKLDSAAVQALNLFPTS
SDGNKNQSILGLMDRCKTVQGQRLLAQWIKQPLMDINRIEERQKLVEFFVKDTELRQLVA
EDHLRRLPDFQRLARKFQQRKATLQDCYRVYQALDKLPHLMETLEKHGMESCQLIMEIFV
NPAKEILMDFAKFQEMVEETMDLQQVENHEFLIKPGFDEELQALSEKISDLEDKIKGQLN
KVARDLGIEANKVLKLESNAQLGYFFRVTRKEEKALRNNKNYITIDTKNNGVRFHNNAVK
QLNEDYLKAKEEYSEQQKSIVAEIISIAAGYCETMVILNELIAQLDVLVSFAVSATSAPI
PFVRPSLLPKGSGNIKLIDARHPCLEMQEDISFIPNDIIFEKDKQMFHIITGPNMGGKST
YIRSAGVVVLLAQIGSYVPCSEAQVTIVDSILARVGAGDNQVKGISTFMAEMLETASILK
SATENSLMIIDELGRGTSTYDGFGLAWAISEHIATKIKGFCLFATHFHELTTLADKIPTV
NNLHVTALTSNDTLTLLYRVKQGPCDQSFGIHVAELAHFPAHVIEFSKKKAAELEDFQSV
ELETSLKGDDEPAVKKRKMEKEEGVEIIQNFLDSVKKLPISSMSDQDILSKMKEMKQQVL
DQNNAFVRDVLAKKN
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatttcaagaccaaggattcatctctgcctttaaaagtcttcctgagaaacca
agtacaactgtgagattttttgatcgtacagattattatacagtccatggacaagatgct
gtttttgttgccaaggaagttttcaagacagttgcagtgataaaatatcttggagcagga
gaaaagaagctggagtccgtaactgtaagcaaactcaactttgaatctctcgtcaaagag
ttgttgttaatacgtcaatatagagttgaaatattgaagaacaaaactggatccaaaaac
aatgaatggatgctagcttttaaagcatctccaggcaatctaactcagtttgaagatatt
ttgtttggtaactccgacatatcccaatctgttggcgtgttaggtttgaagatcggaaca
gaaaataatgagagaatggtgggggttggatttgctgatgtaatgatgagaaaaatgttg
gtagcagaatttgctgacaatgaccagttttcaaatttagaggcattgattgtacaaatg
ggagccaaagaatgtgtagtttggacaggtgatctacacactggaaaactgagacaagtc
ttggaaagaagtaatattctcatcactgaaagaaagaagagcgattttagcagcaaggat
gttgtgcaagatcttaaccgattgctgaagtgtaaaaagggacagcaagtaaacagtgca
actctaagtgaaatggagaaaaagatcgcaatggaagcagtttcggcacttatcaagtat
ttggagctcctgtcaaatgaagattattttggacaattcagcattgggtcttttgacttc
agtcagtatatgaaacttgattctgcagcagtccaagcattgaatctgttccccacctca
tctgatggaaacaagaatcaaagcattcttggattaatggacaggtgtaaaactgtgcag
ggacaaaggcttctggctcagtggataaagcaacctctgatggatattaatcgtattgag
gaaagacagaagcttgtggagtttttcgtaaaagacacagaacttcgacagttggttgca
gaggatcatttacgaaggttaccagactttcaaagattggctcgaaaattccagcagaga
aaagcaacactgcaggattgctacagagtttatcaggcattggataagttaccccattta
atggagactctagaaaagcatgggatggagagttgtcaacttattatggagatttttgtt
aatccagcaaaagaaattttgatggattttgctaaatttcaagaaatggtggaagaaacc
atggacctccaacaagtagaaaatcatgaatttctaataaaaccaggatttgatgaagaa
ttgcaagccctgtcagagaaaattagtgatttggaagataaaattaaaggtcagctgaac
aaagttgctagagatttaggaattgaagcaaacaaagttcttaaattagagagtaatgca
caactggggtatttcttcagggtgacacgaaaagaggaaaaagcattgagaaacaacaaa
aactatataactatagacactaaaaacaacggagttcgttttcacaacaatgctgttaaa
caactgaatgaagattatctgaaagctaaagaagagtacagtgaacagcagaaaagtatt
gtagctgaaatcatttccatagcagctggttattgtgaaaccatggtcattttgaatgag
ttgattgcgcaattggatgtgttggttagttttgctgtgtcagcaacaagtgctccaata
ccatttgttcgcccaagtctgttgcctaaaggcagcggaaatatcaagctgatagatgcc
cgtcacccttgcttggaaatgcaggaagatatctctttcattccaaatgacatcatcttt
gaaaaagacaaacagatgtttcacatcattactggaccaaacatgggaggtaaatctacc
tatattcgttcagcaggtgtggtcgtacttcttgcacagattggttcttatgttccatgc
agtgaggctcaggtgaccattgtggacagcattttggcgagggttggtgcaggagacaat
caggtgaagggcatatcaactttcatggcagaaatgttggaaacggcttcaattctgaaa
tcagcgacagagaactcccttatgatcattgatgagctcggtagaggaacttcgacatat
gatggatttggactggcttgggcaatatctgaacatatcgcaacaaaaatcaaaggattc
tgcctctttgcaacccattttcatgaattaactacacttgccgataaaataccaacagtg
aataacttacatgtcacagctttaacctcaaatgacactttgaccctactctacagagtc
aagcaaggaccatgtgaccagagttttggaatccatgtcgcagaattagctcatttccca
gcacatgttattgagttttcgaagaaaaaggcagcagagctcgaagatttccagtcagtc
gaattggagacttcattgaaaggagatgatgaaccagctgtgaaaaaaaggaaaatggaa
aaagaagaaggtgtggagattatccagaatttcctagatagtgtgaaaaagttgccaatc
tccagcatgtcagatcaagacattctcagcaaaatgaaagaaatgaaacaacaggttctt
gatcaaaataatgcatttgttagagatgtgttggctaagaaaaattga
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