Magallana angulata (Portugese oyster): 128189740
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Entry
128189740 CDS
T09348
Name
(RefSeq) serine/arginine-rich splicing factor 1-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128189740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128189740
Spliceosome [BR:
canu03041
]
Common components
Common spliceosomal components
SR proteins
128189740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
128189740
NCBI-ProteinID:
XP_052717435
LinkDB
All DBs
Position
6:16260054..16263048
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AA seq
229 aa
AA seq
DB search
MSRGNDSRIYVGNLPPDIRARDIEDLFYKFGRITFVDLKTRRGPPFCFVEFEDPRDASDA
VHERDGYNYDGYTLRVEFPRGGGPGGPRSGGGGGGYGFRGGSRGLSGGRGGPPSRRSEYR
VLVSGLPPSGSWQDLKDHMREAGDVCYADVYKDGTGVVEFLRKEDMKYAVRKLDDSKFRS
HEGEVSYIRVKEDYRGGGGRSRSRSRSITPPRRSRASPRYSPVRNRSRS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaggaaatgactctcgaatttacgtagggaatcttccacctgacataagagct
agagacatcgaagatttattttacaaatttgggagaattacatttgttgacttgaaaaca
agacgtggaccgccattttgttttgtagaatttgaggaccctagagatgcatcagacgct
gtccacgagagagatggttacaactacgacggatatacactgagggttgagtttccacga
ggtggaggaccaggtgggccaagatcaggtggaggtggtggtggctacggtttccgtggg
ggcagtaggggcctgtctggtggacgaggaggtccaccatcaagaagatctgaatacaga
gtgcttgtatctggattaccaccatctgggagctggcaggatttgaaagatcacatgagg
gaagctggagatgtatgttatgcagatgtgtacaaagatggaactggagttgttgaattt
cttaggaaagaggacatgaaatatgctgttcgcaaactagatgattccaagtttaggtct
catgagggagaagtgtcttacatccgtgtgaaagaagattacagaggaggtggaggaagg
tcaaggtcccgcagcagaagtatcacacccccaagacggtcacgggcgtccccaagatat
tcaccagtcaggaatagatcacgatcataa
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