Magallana angulata (Portugese oyster): 128190227
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Entry
128190227 CDS
T09348
Name
(RefSeq) uncharacterized protein LOC128190227
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128190227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128190227
03400 DNA repair and recombination proteins [BR:
canu03400
]
128190227
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128190227
Messenger RNA biogenesis [BR:
canu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
128190227
DNA repair and recombination proteins [BR:
canu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
128190227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
RecQ_Zn_bind
Sirohm_synth_C
Motif
Other DBs
NCBI-GeneID:
128190227
NCBI-ProteinID:
XP_052718135
LinkDB
All DBs
Position
6:complement(4817452..4819068)
Genome browser
AA seq
462 aa
AA seq
DB search
MAFQPIRILITYQCSAIVNMAGMFQNVCKRFSLDALKPFQEETITQLLKGRDSFLSVKTG
GGKSICYQGFQLMWTELNGCECSVLIVSPLLSIMKEQCEYLKSCDFTSTYIGRDSSEDID
IINGNFQFLFASPESILSVNKWRDMLVASKHFKLFVVDEAHTVLHWGESEIEMEPFRIWY
SKLGEIRSLIQCPVLLITATANRSARMEMQKKFCMIDCHEIIQNPDRENIKLFVHKFKST
VSHGDIFYFLIHLLKKDKELCERFLIFCPSIKTCSELFSAFRMKLGHIIKHVDMFHSQSP
DTVKEKIKEDMSVESGNIRVLVATSAAGMGVNFRSVKYVINYGPPKDMDGFVQQFGRAGR
DGGVAMALLLFNGKQCRKLDEDMKTYTQNKETCRRDIILSAYKSKSDPKRLRHMCCDICD
VQCDCNSTDCSNFKHPFYKYELPVCSSDSDNSADDMFDDDSD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcatttcaaccaatcagaattcttataacgtatcagtgttcggctatcgtaaacatg
gcgggcatgtttcaaaatgtgtgtaaaaggttcagtttagatgcgttaaaacctttccag
gaggaaacaattacacagcttttgaaaggcagggattcatttctttccgttaaaacaggc
ggtggcaaaagtatttgctatcaaggtttccagctgatgtggacggaattgaacggatgc
gaatgcagtgttttgatagtttcgccattgctttcgataatgaaagaacaatgtgaatac
ttgaaatcttgtgattttacctcaacgtatattggcagagatagtagcgaagacatagac
attatcaatggtaattttcaattcctgtttgcttcaccggaatccattttgtctgtaaat
aagtggagggacatgctcgttgctagcaaacatttcaaactgttcgtcgtcgatgaggcc
catactgtattgcattggggtgaaagtgaaatcgagatggagcctttccgtatctggtac
agcaagctcggcgaaatcagatccctaatacagtgtcctgtcctgttgataactgcaaca
gctaacagatcagctcgaatggaaatgcagaagaagttttgcatgatagattgtcatgaa
attattcaaaatcctgatagagaaaatatcaagctgtttgttcataaatttaagagcaca
gtttcacatggagacattttctactttcttattcacttgttaaaaaaggacaaagaactg
tgtgaaagatttttgatattctgtccttcaattaaaacatgcagtgaattattttctgcc
tttaggatgaaacttgggcatatcattaagcatgttgacatgtttcattcacaatcacca
gacacagttaaagaaaagattaaagaagacatgagtgtagagagtggtaacatcagagtt
ttagttgcaacaagtgcagcagggatgggagtgaatttcagatcggttaaatatgttata
aattatggacctcccaaagatatggatggatttgtccaacagttcggtagagcaggtcgt
gatggaggagtggccatggccttgttactttttaatggtaaacagtgtagaaaattggat
gaagacatgaaaacctatactcaaaataaagaaacttgtcgtagggacatcatactttca
gcatacaaatcaaaatctgaccccaaaagattaaggcacatgtgctgtgatatttgtgat
gtccaatgtgattgtaatagtactgactgttcaaattttaaacatccattttataaatac
gaattgcctgtgtgttcttcagattctgataatagtgctgacgacatgtttgacgacgat
tcagattaa
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