Magallana angulata (Portugese oyster): 128190333
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Entry
128190333 CDS
T09348
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128190333
03016 Transfer RNA biogenesis [BR:
canu03016
]
128190333
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128190333
Spliceosome [BR:
canu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128190333
Transfer RNA biogenesis [BR:
canu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
128190333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ERCC3_RAD25_C
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128190333
NCBI-ProteinID:
XP_052718315
LinkDB
All DBs
Position
6:complement(25000639..25119554)
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AA seq
732 aa
AA seq
DB search
MTAFEEMGVMPELGQAVEEMDWSLPTDVQAEAIPMILGGGDVLMAAETGSGKTGAFCLPI
IQIVYETLRDQQEGKGSKLSSHHSGSTHSAHWKMSPYDRGDAMAIDPEGLLCQARDAQGW
HGTRTNKAVVGGGKYYYEATVTDEGLCRVGWSTDKATLELGIDKFGFGFGGTGKKSWGKQ
FDSYGEAYGINDTIGCYLDLDKMEIKWSKNGVDFGKAYDIQAHLKNERFYAAVTLKNAEM
KFNFGNTPFKYPPQGGFKALSNAPSENVVQSRIVASGAVNAKPAPNAPQAIIIEPSRELA
EQTFNQIQKFKLHLSNPTIRELLIIGGVNIRDQVEVLETGVDVVVGTPGRLEDLISTGRL
ALHQCRFFVLDEADGLLSAGYGDMINRLHQQIPKVTNDGKRLQMIVCSATLHSFDVKKMA
ERLMYFPTWIDLKGQDAVPETVHHVVCDVDPEVDTRWKSLKNHVETDGVHYNDKVSPNNL
SRETMSEAVKILKGEYVIRALEEHKMDKALIFCRTKLDCDNLEKYLQQRGGGKYSCVCLH
GDRKPQERKANLQKFKDNKVRYMICTDVAARGIDINGLPYVINVTLPDEKQNYIHRIGRV
GRAERMGLAISLVATVKEKVWYHSNCNTKGRGCYNTNLTDHGGCCIWYDEPKLLSDVQEH
LDITIDKVDPSMKVPVNEFDGKVTYGQKRRNTGGSYQGHVASLAPAVKELAELEKRAQTS
FIDLKYKKFAQR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttgaagaaatgggtgttatgcctgaacttggacaggcagtggaagaaatg
gattggagtttgccaaccgatgtacaggcagaggcaattccaatgattctgggaggtgga
gatgttttaatggctgctgaaactggaagtggaaaaacaggggcattttgtttgccgatt
attcaaatcgtttatgagacattgagagatcaacaagaaggaaaagggagcaagctgtcc
tctcaccattcaggatctactcatagtgcacattggaagatgagtccatacgacagaggt
gatgccatggcaatagacccagagggactgttatgtcaggctagggatgcccagggctgg
cacgggaccaggaccaacaaggcagtggtgggcggaggaaagtactactatgaggccaca
gttacagatgagggtctgtgtcgtgttggctggtccacagataaagcaacgctagagtta
gggatagacaagtttgggtttggctttggaggcacagggaagaagtcctggggcaaacag
tttgacagctatggagaggcttatggaattaatgacaccataggctgttaccttgatttg
gataaaatggaaattaaatggtccaaaaatggagtggattttggaaaagcttatgatatc
caagcacatcttaaaaatgaaagattttatgctgcagtgacactcaagaatgctgaaatg
aaatttaactttggaaacacgccatttaaatatcctccacaaggtggatttaaagctctg
tctaatgccccatcagagaatgttgtacaatctagaattgtggcttcaggagctgtgaat
gcgaagcctgccccaaatgcccctcaagccatcataatagaaccttcaagagaactggca
gaacagacatttaaccaaatccagaaatttaagttgcatcttagtaatccaactataaga
gagctgcttataattggtggagtgaatatcagagaccaagtggaagtactagaaactgga
gtggatgtagtggtgggcacccctggtcgtctggaagatctgatctccaccggaaggctt
gccctgcatcagtgccgcttctttgtactggatgaagccgatggattgctgtctgctgga
tatggggacatgatcaacagacttcatcaacagatccctaaggtcaccaacgacggcaaa
cgcctgcagatgattgtctgctcagctacgcttcactcctttgatgtcaagaaaatggct
gagaggttaatgtatttccccacttggattgacctgaagggacaggatgctgtgccagaa
acagttcaccatgtggtgtgtgatgttgacccagaagtagatacaaggtggaaatcactc
aagaaccatgtagagactgatggagtacactacaatgacaaggtgtcacccaacaacttg
tcaagagagaccatgtcagaagcagtgaaaatcttgaaaggagagtatgtgatccgggct
ttggaagaacacaagatggacaaggccctcatcttctgtagaaccaagctggactgtgac
aacttggagaaatacttacagcagagaggaggaggcaaatattcctgtgtttgtttgcat
ggagacagaaaaccacaagaaagaaaggcaaaccttcaaaagtttaaggataataaagtc
cgctatatgatttgtacagacgttgctgcccgaggaatcgacatcaatggtttgccttat
gtcataaatgtgacgcttcctgacgaaaaacagaactacatccatcggattggcagagtc
ggaagagctgaacggatgggtttagctatatctttggttgctacagtaaaggaaaaggta
tggtaccattcaaattgcaacaccaagggacggggctgctacaacacaaatctgactgac
catggtggctgctgtatttggtacgatgaaccaaagctactctcagacgtacaggaacat
ttagatattaccatcgacaaggtcgatcccagcatgaaggtcccggttaatgagtttgac
ggcaaagtcacgtatggacagaagcgcagaaatacaggtggatcctatcaaggacatgtg
gcttctctggcacctgcagtgaaagaattggccgaactggagaagagagctcagacttcg
tttattgatctgaagtacaaaaagtttgcccagcgttag
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