Magallana angulata (Portugese oyster): 128190665
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Entry
128190665 CDS
T09348
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128190665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128190665
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128190665
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
128190665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128190665
NCBI-ProteinID:
XP_052718746
LinkDB
All DBs
Position
6:31755315..31763383
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AA seq
290 aa
AA seq
DB search
MAEVDLSDAEKIFIKHGVQDNCREDGRGCEDYRHIELETGLLSNTTGSARVRLANTDILA
GVKAELGTPSPDKPNKGRLEFFVDCSANATPVFEGRGGEELAAEIGNILTRTYDCPSCFD
LEALCIIPEEQCWILYVDVLLLECGGNLFDVASIAVKAALYNTKIPKVTVSRDEGLVELE
ISDDPYDVQRVEVQSAPCIVTVCKIGHSHVVDASLKEEACCLARLTMGVTERSTVTGVRK
EGSGSLDPASLEDMMQTGKRVGELLNKSLMDSLLEEERQGSKKKPVGFLK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagttgatttgagcgatgcagagaaaatttttataaaacacggtgtacaggac
aactgtcgagaagatggaaggggatgtgaagattatagacatatagaacttgagactgga
cttttgtccaacacaacaggatcagcacgtgtgagactggcaaatacagacattcttgct
ggtgtaaaagctgaacttggaacaccttccccagacaagcctaacaaaggcagactagag
ttttttgttgattgttcagctaatgccacccctgtgtttgagggaagagggggagaagaa
ttagcagcagagataggaaacattttaaccagaacatatgactgtccaagttgctttgat
ttggaagccctatgcatcattcctgaggaacagtgctggatcctctatgttgatgttctt
ctactagagtgtggaggaaacttgtttgatgtggcctcaatagcagtaaaggcagcactt
tataacacaaaaattccaaaggtgactgtcagcagggacgagggtcttgtggaactggag
atttctgacgatccctatgatgtgcagagagttgaggtccagtcagcaccttgtattgtc
acagtgtgcaagattggtcactctcatgttgtggatgctagtttgaaagaagaggcttgt
tgtttagcaagactgacgatgggtgtgactgagaggagcacggtgacaggagtaaggaag
gaggggagtggcagcctggaccctgctagcctggaggacatgatgcagactggaaaaaga
gttggtgaacttcttaataaaagtttgatggactcgctattagaagaagaacgccaagga
tcaaagaaaaaacctgtcggttttttgaaataa
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