KEGG   Magallana angulata (Portugese oyster): 128190888
Entry
128190888         CDS       T09348                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27-like isoform X1
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
canu  Magallana angulata (Portugese oyster)
Pathway
canu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:canu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128190888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:canu03041]
    128190888
   03400 DNA repair and recombination proteins [BR:canu03400]
    128190888
Spliceosome [BR:canu03041]
 Complex B
  Other components
   Prp19 complex
    128190888
 Complex C
   Prp19-CDC5 complex
    128190888
DNA repair and recombination proteins [BR:canu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    128190888
SSDB
Motif
Pfam: BCAS2 EzrA HmpF Csm1_N Phage_SPbeta_YosX Dsc3_C PigL_N Golgin_A5 Cep57_CLD
Other DBs
NCBI-GeneID: 128190888
NCBI-ProteinID: XP_052719064
LinkDB
Position
6:32585380..32608343
AA seq 223 aa
MAGEVVVDALPYFDRGYDEPGVREAALSLVEEETRRYRPTKNYLEYLPAPSYNAFETEIM
KNEFERMQARLPMEMLSMKRYELPQPSAGKMTDISAWTECVDNSQAQLEHQALRILNLEL
MADNGSNAWKQYNTILVQMMENAQKHLQDLRKQIQEINWRRKSEQTEAGNKLKELEDSWV
GLVSKNYEIERACVELEKEVTSIEQKKAKVKLHVLGLKIFFLF
NT seq 672 nt   +upstreamnt  +downstreamnt
atggctggcgaagttgtcgtcgacgctttaccatattttgatcgcggttatgatgagcca
ggagtgagagaagcggctctgtcacttgtggaggaagaaactagaagatacagacctact
aaaaactaccttgaatatttaccagcaccaagctacaatgcttttgagactgaaataatg
aaaaatgaatttgaaaggatgcaagcacgattaccaatggaaatgttgagcatgaagaga
tatgaactgcctcagccatcagctggtaaaatgacagatatatcagcatggacagaatgt
gtagataactcccaagcacagctggaacatcaagctctgagaattcttaacttggagttg
atggcagacaatggatccaatgcttggaaacaatacaacacaatcctggtacagatgatg
gaaaatgcccagaaacatctgcaagatctcagaaagcaaattcaagaaattaattggagg
agaaagagtgaacaaacagaggctggaaacaaactgaaggaactagaagacagctgggtt
ggccttgtaagcaaaaattatgagatagagcgagcttgtgtggaactggaaaaagaagtg
acaagtatagaacagaaaaaagcaaaggtaaaactacatgtattggggcttaaaatcttt
ttcttattctaa

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