Magallana angulata (Portugese oyster): 128191475
Help
Entry
128191475 CDS
T09348
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128191475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
canu03400
]
128191475
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
128191475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
128191475
NCBI-ProteinID:
XP_052719523
LinkDB
All DBs
Position
1
Genome browser
AA seq
1345 aa
AA seq
DB search
MGPKQTPSKQGNTLFSYFSKSPAASKSSQPNVNGSDVLSQKKSPNKQETPTPVKQAKKEP
NDQNYKEGDIVWSKLAGYPWWPSLVCSHPTENTHLKQGKNPQVHVQFFDTPPTRSWIKAK
DVIPYKGSDHEDYKKGGKCHSLNPKVKKGTQEADDALKLSLEDRLKLVVDLQPSSDEEEE
EMDVEEGGESEENEADNSKENENEEKPKGRTRGHAAKRRRIVVASDSGESDDEFKPHSDE
GSSEDEVSSGVDEDKISEPETESEIDSPVKKSRKAEVPSRKRKRPEKTTKPWRPKKSETK
EDEAGSEDEASTSPSTSRSLALSTPSVGMKTKSKLASFAAVDLDTKPAKGPQEETNYPYL
KLEFLQPDKIKDIKKKSKNDPEYDPKTLYVPDSFLKQQTPAMRQWWELKSKHYDAVLFFK
MGKFYELFNMDAAVGVKELGLIYMKGEQAHSGFPEIAYSRYADMLIQKGYKVARIEQTET
PDMMTERVKNMGIPATKFDKVVKREICRITTKGTQTFNVTDGDIAEANSSYLLALCEKDD
GQFGQSTYGVCFVDTTIGKFQMGQFTDDRYCSRLRTLIAHFTPVQVLMPRGRVSEKTSSL
INNNLSSVIKEYLRPDTEFWDSSKTLKVLAEEEYFKCEEEVVWPECLKKMMSDGDTLCLS
AADEYSLAVSSLGAMIWYLQYSLMDQELLSMKNFEEYIPVDSEKTTIKEKSAFMKNQHMV
LDGLTLRNLDVADLYGSQEGTLLSRLNQCVTPFGKRLFKQWLCAPLCNPSSINDRLNAVE
DLNVVPDIMAEVIDMIRKLPDLERILSKFHSLGSAARCKTHPDSRAIFFDEAKYSKKKIE
DFLSTIEGFKVAQKVALKFKSHVENFTSKLLKQTMTLDTADDKGLFPDLKKELDFFDNAF
DHAKAKKDGVILPNKGVSPEYDSAKADLKAAERGLEEYLDRQRQRLGCRNLTYWGSGKNR
YQIEVPESALKKVPDEYHLMSSKKGAKRYRTTDIEDQLVDLTDAEERKDAALKDTMRRLF
YSFDERYKTWDTAIQCLSVLDVLMSLAKYVGAADGVTCRPEIIEPSSDTEPFVEIREARH
PCVTRTFGGGDFIPNDTVIGIPDELDMEEGDEQNSSSKIVLVTGPNMGGKSTLMRQVGLI
TVMAQMGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFYVELSETAAILQHATKHSLV
LIDELGRGTATYDGTAIACAVVRELSESLCCRTLFSTHYHSLVEEFSHDPNIRLGHMSCM
VENEGDPAEETITFLYKFAKGACPKSYGFNVARLANIPDEVVKLAKEKAKEFEFDVERKK
LFRSLWNDDSVENIKKTQQLIPDEA
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgaaacaaaccccgtccaagcaaggaaacacccttttttcttatttttccaaa
agtccagcagcaagcaagagtagtcaaccaaatgttaatggatcagatgtgttgtcgcag
aagaaatcgcccaacaaacaggaaacccccacaccagtgaagcaggcgaaaaaggaacct
aacgatcaaaactacaaggagggagacatagtatggagtaagttggcaggatacccttgg
tggccatctttagtctgttcacacccaacagaaaacacacacctaaaacaagggaagaac
cctcaggttcatgtacagttttttgacacacctccaacaagatcatggataaaagcaaag
gatgttataccctataagggctcagaccatgaggactacaagaaaggtggcaagtgccac
tctctcaatcctaaagtgaagaaagggacacaggaggcagacgatgccctgaaattgtca
ttggaggatcgattaaagctagtggtggatctccagccctctagtgatgaggaggaagag
gaaatggatgtggaagagggtggagaaagtgaggaaaacgaagcagacaatagcaaagaa
aatgaaaatgaagagaaacccaaaggcagaacaagaggccatgctgcaaagagaaggcga
atagtcgtggccagtgacagtggagaatcagatgatgagtttaagccccactcagatgaa
ggctcctcagaggatgaagttagtagtggagtagatgaagacaaaatttcagaaccagaa
acagagtcagaaatagattccccagtcaagaaatcaagaaaagctgaggtaccttcaaga
aaaaggaaaagaccagaaaagactacaaaaccatggcgaccaaagaaaagtgaaacgaaa
gaagacgaggctgggtctgaggatgaggcgtctacttctccctccacaagccgctctctt
gccctctccacaccatctgttgggatgaaaaccaaatctaaactggcctcttttgctgct
gttgatctggacacaaaacctgccaaaggaccacaggaggaaacaaactatccatacctt
aagttagaattccttcagccagataaaatcaaggatataaagaaaaaaagtaaaaatgac
ccagagtatgatcccaaaactttgtatgtacccgattcctttttgaagcaacagacacca
gcaatgagacagtggtgggaattgaaatccaaacattatgatgctgtcttatttttcaag
atggggaagttctatgaattgttcaacatggatgctgctgttggagtgaaggaacttggg
ctgatctacatgaaaggagaacaagctcactcaggttttccagaaatagcatacagtaga
tacgcggacatgctgatccagaaaggttacaaggtcgccaggatagagcagacggagacc
ccagacatgatgacagagagagtcaaaaacatgggaatccctgccaccaagtttgacaaa
gtcgtcaaaagagagatctgtaggatcaccaccaaaggcacccagacatttaatgtgaca
gatggggatatagctgaggcaaacagtagctatctactggctctctgtgaaaaggatgat
ggtcagtttggacagagcacctatggagtgtgttttgttgacacaacgataggaaaattt
cagatgggacagttcacagatgacaggtattgttccaggttaaggacactgatcgctcac
tttacacctgtgcaggtactgatgccaagagggagggtgtctgaaaagacatcaagcctg
atcaacaataacctgtcctccgttattaaggagtacctacgaccagacacagaattctgg
gatagcagtaagaccctcaaagtcctagcagaggaggagtacttcaagtgtgaggaggag
gtggtgtggccagagtgtctcaagaagatgatgtctgatggggacactctatgtctgagt
gctgctgatgaatacagtctggctgtgtcttcattgggagccatgatctggtacctgcaa
tacagtttgatggaccaggagctcttgtccatgaagaactttgaggaatacatccctgta
gactcagaaaaaaccactattaaagaaaagtctgctttcatgaaaaatcagcacatggta
ctggatggactgaccttgagaaaccttgacgtggccgacctctacgggtcacaggaagga
actctgttgtctcgactgaaccagtgcgtcactccatttggtaagcggttgttcaagcag
tggttgtgtgcccccctctgtaacccttcctccatcaatgatcgactcaatgctgtggag
gatctgaatgtggtcccagacatcatggctgaggtcatagatatgatcaggaaacttcct
gacttggagcggatactcagcaagttccacagcctgggatctgcggctcgttgtaaaaca
cacccagatagtagagccatcttctttgatgaagcaaaatacagtaagaagaaaatagag
gatttcctatctacaatagaaggatttaaggtggcacagaaagtagcattgaagttcaag
tctcatgttgagaatttcacgtcgaagctgcttaaacagactatgacattagacacagct
gatgataaagggctatttcctgatttgaaaaaggaattggatttctttgataatgctttt
gaccatgcaaaggcaaagaaagatggggtcattctaccaaacaaaggagtgagtccagag
tatgacagtgctaaggcggatctgaaggcggcggagcggggactggaggagtacctggac
agacagagacagaggctgggctgtagaaatctgacttactggggatctggaaaaaatcgc
tatcaaatagaagtaccagagagtgcactgaagaaggtcccagatgagtaccacctgatg
tcatccaagaagggggccaagcggtaccgtaccacagacatcgaggatcagttggtggat
ctgactgatgctgaggagcgtaaagacgctgccctcaaggacacaatgaggagacttttc
tacagctttgatgaaagatacaagacctgggatacagccatccagtgtctgtcagtgttg
gacgttctgatgtccctggctaaatatgtgggggcagctgatggtgtgacctgtagacca
gagatcatcgaacccagctcagacacagagccttttgttgagatacgagaggcaagacat
ccttgtgtcactaggacttttggaggaggagactttatccctaatgacactgtcatcggc
attccagatgagttagacatggaggagggagatgaacagaacagcagcagtaagatcgtc
ctggtaactggtcctaacatgggaggtaaatctactctcatgaggcaggttggactaatc
accgttatggctcaaatgggatgttacgtacctgctgaaaaatgtcgactcactcctgtg
gacagagtgtttacaagacttggagccagtgacagaataatgtcaggtgaaagcactttt
tatgtggagttaagcgagacagcagctatcttacaacatgctactaaacactcacttgtc
ctgattgatgaattgggtcggggtacagctacctatgacgggacggccattgcgtgcgcg
gtggtgagggagctgtcggagagcctgtgttgtaggacgctgttctccacacactatcac
tccctggtggaggagttctcccacgacccaaacatcagactgggacacatgtcctgtatg
gtggagaatgagggagatccagcagaggaaaccatcacctttctctacaaatttgctaaa
ggagcatgtcctaagagctacggttttaatgtggcacgactagccaatattccagacgag
gttgttaaacttgccaaagagaaagccaaggaatttgaatttgatgtagaaagaaagaaa
ttattcaggtcattatggaatgatgactccgtggagaacattaagaaaacacagcagctt
attccagatgaggcctag
DBGET
integrated database retrieval system
