KEGG   Magallana angulata (Portugese oyster): 128191509
Entry
128191509         CDS       T09348                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
canu  Magallana angulata (Portugese oyster)
Pathway
canu03030  DNA replication
canu03410  Base excision repair
canu03420  Nucleotide excision repair
canu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:canu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    128191509
   03410 Base excision repair
    128191509
   03420 Nucleotide excision repair
    128191509
   03430 Mismatch repair
    128191509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:canu03032]
    128191509
   03036 Chromosome and associated proteins [BR:canu03036]
    128191509
   03400 DNA repair and recombination proteins [BR:canu03400]
    128191509
DNA replication proteins [BR:canu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    128191509
  DNA Replication Termination Factors
   ELG1-RFC complex
    128191509
Chromosome and associated proteins [BR:canu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    128191509
DNA repair and recombination proteins [BR:canu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     128191509
  Check point factors
   HRAD17(Rad24)-RFC complex
    128191509
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_16 AAA_22 AAA_11 AAA_2 ABC_tran AAA_5 Nterm_IS4 DUF2247
Other DBs
NCBI-GeneID: 128191509
NCBI-ProteinID: XP_052719571
LinkDB
Position
7:complement(47326050..47330004)
AA seq 354 aa
MSLWVDKHRPSSLNKLDYHKDQATLLKKLVNGGDFPHLLVYGPSGAGKKTRIMCLLRELY
GSGVEKLRIEQHNFTTPSNKKIEISTISSNYHIEVNPSDVGIQDRVVIQELIKTVAQTNN
LDSSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCVSTSKVIPAIRSRCLG
IRVAAPSIDEITQILQTVCKKEGCPIPTELAKRVAEKSKRNLRRALLMAEACKVQQTPLK
PDQEVSEPDWEVYLRETANMIIQQQSPRRLLEVRGRLYELLTHCIPADIIMKGLLQELIN
NCDGELKTEVVQSAAFFQHRLQLGQKAIYHLEAFVAKFMAIYKRFMEENIADLF
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtagacaaacacagaccttcgtcattgaataaacttgattaccataaa
gatcaagcaactctcttaaagaaactggttaatggaggtgattttcctcacctgttggtc
tatggaccctcaggagcaggtaagaagacacgcatcatgtgtcttctgagagagttgtat
ggatcaggagtagaaaaacttagaattgaacaacacaatttcacaaccccatccaacaaa
aagattgaaatctctaccatctccagtaattaccacattgaagtcaatcccagtgatgta
ggaatacaggacagggttgttattcaagaactaatcaagaccgtggcacaaacaaataat
ttggattcttcacagaaagattttaaagttgttctcttgactgaggttgataagctgaca
aaggatgcccagcatgctcttcgtcgtaccatggagaagtacatgtcaacctgcaggctg
atcctgtgctgtgtgtccacaagtaaagtcattccagccattagaagcaggtgcttggga
atcagggttgcagctccaagtattgatgagataacccaaattctgcagacagtttgtaaa
aaagaaggatgtccaataccaacagagttagctaagagggtggcagagaaaagcaaaagg
aatctcaggagagcactgctgatggccgaagcttgcaaagtgcaacaaactccattaaaa
ccagaccaggaggtttcagagccagactgggaagtttatctgagagaaacagcaaacatg
attatacagcaacaatctcctcggcgactgttggaggtcaggggtcgcctctatgaactt
ctcacccactgcatacctgccgacatcataatgaagggattgcttcaagaattgatcaat
aactgtgacggagaactaaaaacagaggtggtgcaatctgctgcatttttccagcaccgt
cttcagctaggacagaaggcaatctaccaccttgaggcattcgtggccaaattcatggcc
atttataaaagatttatggaagagaacattgctgaccttttctaa

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