Magallana angulata (Portugese oyster): 128191527
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Entry
128191527 CDS
T09348
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128191527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128191527
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128191527
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
128191527
NCBI-ProteinID:
XP_052719600
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Position
7:52065538..52076514
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AA seq
481 aa
AA seq
DB search
MATEVQSSAPASTPAEDDETWLYGDENKEKDKAQEATGESNGNDTKENKKDDREAGELSG
EEESQDKGNDDDDDDSDDDVQVTIGDIQAFPLGDGSRNLFKAPGYQKAGTGTAGKGGTTA
GAQKGVDIEAVGSINGIPAYDFDLETLQSDEKPWRKPGADITDYFNYGFNEDTWQQYCEK
QRRLRGENQGSRTYTHSSSGIKKDITETPQNVPVLSGRKAIVTIPRKTSGTIDVIGGTAR
DSRRPEGEPIQVAGKYQSAIPSHPPPGMDFSVPPPGMPPPGVPPPGMAVPPGVPPPGIPG
IPPPGFPDFDPFFPPPGQPSSTRYDDRPPFSYDNQHTSYPTSYPDPHSSSWDRTEAYWRE
YVGRDRSPARSESEFSSSGSERDYRYRDSSRSSRYDRDRDSYRRDRDTERSRDRDRDRSR
ERDRDRDRDRDRRHRDDKHKSRRKDKEDESSRSKHKKSKRSRRDKDEDSGNTGSESTSKV
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaagtgcaaagcagtgctccggcttccacacctgctgaagatgatgagaca
tggctgtatggtgatgagaacaaagagaaggataaagctcaggaagcaactggtgaaagc
aatggcaatgacaccaaagaaaataaaaaggacgaccgagaggctggagaattgagtggt
gaagaagaatcccaagacaaaggaaatgatgatgatgacgatgactcagacgatgatgta
caggttactatcggtgacatccaggcctttccattgggagatggctccagaaatctattc
aaggctccaggctatcaaaaagctggcacaggaactgctggcaaaggaggcacgactgct
ggggctcagaagggggtcgatatagaggctgttgggtctataaatggaatcccagcatat
gactttgacctggaaactctgcagtcagatgaaaaaccttggagaaaacctggtgctgat
atcacagactactttaattacggttttaatgaagacacatggcagcagtattgtgaaaag
cagagacgactaaggggtgaaaaccagggctccagaacatatacacacagttcctcagga
ataaagaaagatataacagagaccccacagaatgtccctgttttgtcgggtagaaaagcc
attgtgaccatacctagaaaaacctcgggcaccattgatgtgatcggtggaacagctcgc
gactcacggagacccgagggagaacccattcaagtggcagggaaataccaaagtgccatt
ccttcccacccaccccctggtatggacttcagtgtgccacccccaggaatgcccccacca
ggggttcctccccctggaatggcagtgccacctggagttcctccgcccggtatcccagga
atccctcctcccggctttccagattttgatccattctttcctccgcctggacaaccctca
agtacacgttacgatgaccgacccccctttagttacgacaatcagcatacgtcctaccca
acatcttacccagacccacattcctcctcatgggacagaacggaggcttattggagagag
tatgttggaagagacagaagtccagccagatctgagtctgagttcagcagttcgggcagc
gagcgtgattacagataccgtgattcgtctcggagtagccgttacgacagagacagggat
tcttatagaagagacagagatacagagagatctcgtgatcgggatagggacagatccaga
gagcgagatagggatcgggaccgagatagggacagacgacacagagatgacaaacacaag
tcacgcagaaaggacaaagaggatgagtctagtaggtctaagcacaagaaaagcaagcgt
tcccggcgggacaaggatgaggattctgggaacacaggatctgaatccaccagcaaagtt
gattag
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