Magallana angulata (Portugese oyster): 128191698
Help
Entry
128191698 CDS
T09348
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128191698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128191698
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128191698
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
128191698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
128191698
NCBI-ProteinID:
XP_052719865
LinkDB
All DBs
Position
7:complement(24406843..24417716)
Genome browser
AA seq
292 aa
AA seq
DB search
MDIRVSAAAKDRDTRSHVEEIENLVTPGDIITSDSGFMRGHGTYNSEDDRLLASVAGVVE
RVNKLICVKPLKTRYNGEIGDVVIGRIIEVQQRRWKVETHAKLDSSLLLSSVNLPGGELR
RRSEEDEKMMREYLKEGDLISAEVQSVFADGSLSLHTRSLKYGKLGQGTLVQVSPSLIKR
RKTHFHHLPCGATIILGNNGYVWICPTETEEMDQTGGYELNWKPVQRSDREVVARLRNCV
QLLAAQKMQLYDTSVLYTYEASLNFKIKDILKPEIGLEILEQTQHRLEIEGT
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggatattagggtcagtgcggctgcgaaggacagagatacaagatcacatgtagaggag
attgaaaatctagttacaccaggggatataattacttcagattcaggtttcatgcgagga
catgggacctataattctgaagacgacagattattagcttccgtagcaggggttgtggaa
cgggtcaacaaactgatttgtgtcaaacccttaaaaacaaggtataatggagagataggg
gatgtggtgataggaagaatcattgaggtccagcagagaagatggaaggtggagactcat
gcaaagttagattcctctctcctcctgtcatccgtcaatctacctggaggagaacttaga
agaagatctgaggaagacgaaaagatgatgagagagtaccttaaggagggtgacctaatt
agtgcagaggtccagtctgtgtttgctgatggctccctctcattgcacacaagaagtctc
aaatatggcaagcttggacaagggaccttggtccaggtttctccgtctctgattaagcga
agaaaaacacatttccatcacctgccttgtggagccaccattattctgggaaacaatggc
tatgtgtggatctgtccgaccgaaacagaagagatggaccagacagggggttatgagctc
aattggaagccagtacagaggtcagacagagaagtggttgctaggttacggaattgtgtg
cagctgcttgctgctcaaaaaatgcagttgtatgacaccagtgtactttatacctatgaa
gcatcccttaactttaagattaaggatattttgaaaccagaaattgggttagaaatcctt
gaacagacacaacatagactggaaatagagggaacatga
DBGET
integrated database retrieval system
