Magallana angulata (Portugese oyster): 128192012
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Entry
128192012 CDS
T09348
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128192012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128192012
03036 Chromosome and associated proteins [BR:
canu03036
]
128192012
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128192012
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128192012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
128192012
NCBI-ProteinID:
XP_052720358
LinkDB
All DBs
Position
7:48852543..48870234
Genome browser
AA seq
1758 aa
AA seq
DB search
MFGAKPTGFSFGSGNATFGASSTTPFGAGNTSTFGTAGNKTFGGTPAFGSQTPNTGGTSL
FGQQSTSQTAGLFGQQSTGGAFGSTQSSGFTFGATPATNPGGSMFGQQSTAQTTGGLFAS
PVSNTSFGAKTPGFGGFGTNTSTSAGLFGGSQQTSTLFGNPGASAGFVQTAPNGTTVKFN
PPTSQDTMVKNGVSTNINTRHQCITAMKEYQSKSLEELRVEDYLSNRKGKQATTGFATPS
ASGTFNPTPASTGTSLFGQQQQPQQPQQQSTSLFGQNKPLFGASTATGTSGFSGFGTTTS
TPSLFGQPTQNKPLFGSTPTTQAAGFGGTSAGFGGFGGFGSTSTAGSSLFNSKPAFGTTT
TAASGFGAPANNLFAKPTTGPSLFGSTSQPTSFGTTSGFSFGSTAGIGGTSTGGFGAKPP
PFGGTSTFNLGQTSGFSLSKPFGASTGIGTGFGPGFGMSTSLSQGGASTTLSSAAPQAAA
VPNEIQIKQQLMALASSPYSDSPLFWNLKPSDKKREEILKPTNPSAQKAVLSNQYKVSSR
PTAKMKPKSLHNMLNGSKNHIFEGLEDDDFSGGNESFMPKKSIKKLVIRKGSSNSSSPSR
ASSVLGESENHSVNEADLTQNGNSFLHDRLEKEQRIPEVHIPSKPMSENFDDTISQLNVH
KRVPITSKSPDDTDLSLNQTVDESIERPTTPPPPNLAGIVLTRPGYYTIPSVEELCELVD
ENGDCFVDGFTVGREGYGSIFFPGQINVANLNLDEIVHIRRKEVIVYPDDDNKPPEGEEL
NRKAEITLDCVWPTDKTTRSYIKDPERLKTLGYHEKMEEITARIGGRFLDYRPETGSWVF
EVKHFTKYGLEESDEEDLSALAQMKATSQKLQKTIKSGPTLEGERKPPASSVREAPAPQP
QDTAVPMTDDDIEGLPDISQETAPDSMVEDYSGEGYEEEMEEQPSSHRLAQSMGVSAQNM
QVMKASFFHEEDVPQQPDVLSSTRLEGKRGPSMFSSAYKNSFMSPVKLSSVPKSANIEKE
RGAFPPRIVTPEPIRPVKSKYQMPPVDEHQPIPSGMKSDDLPRRIVGSRIARAIPEFNKS
NMYDKQNVIWDAGLIHGRSFRVGWGPGWTLAHAGLTVTDRSTGAEETSFSMLSGSRKRKI
GQTNWNVALEKLNATSYFQPDDPIVVRNHEELLSIQLEHAGRDVEEGCPVFAPRDGEVSL
QHIVERIKQDKNDTEGHPDHASVSYAETIWNLCAALFGTLPDDIVNNYELQNARREAVSR
WLSSTARDKIQKEIHEAKYKGKNHLPALFAHLTGRQVAAACSLSQKSGDTRLALVLSQCM
GSPYPKHLLDMQLNEWAELGAYKFIEELRLKLYVLLAGRMVWQTPQSVVNTCMDLDWKRA
FALHLWYMCPPTAPAQITKALEEYEMGCSGDSPLGMYCSPPLPPYLEEDQMGDTENIRDT
AYHLLKLYSERTYALESLFNPRSSTANHMDYRLSWHLLQVLQSVQAQYRHLSAYNTTCLH
LSFAAQLESIEMWEWAVFVVLHLEDRRSREWRTRDLLHRYVSVEEEFNEQEVFVREKLGI
PVEWIHYAKALKARNDRNHHAEAVHLLNSKRWNECHKVLLCHLSSDAIINENHGYLHRFL
VELAPHDRCKQIVDWSAGGQVLLDYITLVSKLEQIKLDIERNEQGRGVAVDSLRTDITSL
CDRISNLPCYQSRDRLCQSEISKRLSVLFHTILNLQGDQDLSVRLMAPYIGQLPMPEDYR
LQELSSLTRNFSASYLRL
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcaaaaccaacaggattttcttttggatctggcaatgctacatttggtgca
agttctacaaccccttttggagcagggaacacatcaacatttggaactgcaggcaataaa
acatttggaggaacgccagcatttggttcccagaccccaaacacaggaggcaccagctta
tttggtcagcagagcacgtctcagacagcaggcttgtttggccagcagagcacaggaggg
gcctttggcagcacccagtcatcagggtttacatttggtgctacacctgccaccaaccct
ggaggcagtatgtttggtcagcagagcacggcacagacaacaggggggttgtttgcctca
cctgtgtccaacacaagttttggagccaaaactccaggatttggaggatttggtacgaac
acttcaacatctgcaggattgtttggaggaagtcaacaaacatcaactctttttggtaac
ccaggtgctagtgcaggttttgttcagacagctccgaatggaacgactgtcaagttcaac
cctcccaccagccaagatacaatggtcaagaatggagtcagcacaaacatcaatacacgg
catcagtgcatcaccgcaatgaaagagtaccaaagcaaaagtctagaggagctccgagtg
gaagactatttgtcaaatcgcaaagggaaacaggctactactgggtttgcaaccccatca
gcttctggaacatttaatccaactccagcctcaactggtacatctttgtttggacaacag
caacagccacaacagccacaacaacaaagtacaagtttatttggacaaaacaaacctttg
tttggagcttcaactgccaccggaacatcgggcttctctggctttggcaccacaacttca
actccaagtttgtttggccagccaactcaaaataagcctctctttggttctacaccaact
acccaggctgcaggctttgggggaacaagtgcaggatttgggggatttggtggctttgga
agtactagcactgcaggttcaagtctgtttaactcaaagccagcatttggaaccaccacc
actgcggccagtggttttggagcacctgccaacaatttgtttgccaaaccaaccacagga
cccagcctctttggaagcacatcccagcccaccagctttggaacgaccagtggattttcc
tttggaagtactgctggaataggaggaaccagcacaggagggtttggagctaagcctcca
ccatttggaggcaccagtacctttaacttaggccagacttctgggtttagcctcagtaaa
ccatttggtgccagtacaggaatcggcacaggatttggaccaggctttggtatgagtaca
agtttgtctcaaggtggcgcttcaactaccttaagctcagctgcccctcaagcagcagca
gttcccaatgagattcaaatcaaacagcagttgatggctctggctagctccccatacagt
gattccccattgttttggaatctgaagccaagtgacaagaaaagggaagaaatcttgaaa
ccgacaaacccctcggcccagaaagctgttctgtccaatcagtataaagtcagctccaga
ccaacagccaaaatgaaacccaaatcattgcacaacatgctcaatggctcaaagaaccac
atttttgagggcttggaagatgatgactttagtggtggaaatgaaagcttcatgccaaag
aagagcatcaagaagttggtgatccgaaaaggtagctccaactccagttcacctagccgt
gcctcatcagtgttgggagagtcagagaatcacagtgttaatgaagctgacctcacacag
aatgggaactcattcttgcatgacagactagagaaagagcagagaattcctgaggtccac
attccatcaaaacctatgtcagaaaactttgacgacacaatatcgcaattgaatgttcat
aaacgagttcctataacatctaaatctccggatgacacggatctcagtctgaatcaaaca
gtagatgaaagcatcgagagacctaccacacctccaccacctaacttggcaggtatagtc
ctgactcgtcctgggtactacacaataccctcagtggaggagctttgtgagctagtggat
gagaatggagactgttttgtggatggctttactgttgggagggagggatacggaagcata
ttcttccccggacagatcaatgtagccaacctcaatctggatgaaattgtgcatattcga
cgtaaggaggtcatcgtgtacccagatgatgataacaagccacccgagggtgaggagttg
aacaggaaggcagagatcaccctagactgtgtgtggcccacagataaaacaactcgatcc
tacattaaggatccagagagattaaagaccttaggataccatgagaaaatggaagaaatt
acagctcgcattggtggcaggttcttggactatcgaccagaaactggctcatgggtgttt
gaggtgaaacattttacaaagtatggtttggaggagagtgacgaggaagacttgtctgcc
cttgctcaaatgaaggcaacgagtcagaaattgcaaaagacgattaagtctggacctaca
ttggaaggggagaggaaacctcctgcatcctcggtgagagaagcacctgctccacagccc
caggacacggctgtacctatgacagacgatgatatcgagggtctccctgatatatcacag
gagacggcccccgatagcatggttgaggactactcaggtgagggatacgaggaggagatg
gaggagcagccttcctcccatcgcctcgcccagagtatgggagtcagtgcccagaacatg
caggtcatgaaggcctccttcttccacgaggaggatgtaccacagcagccagatgtattg
agttcaactcgtctagagggaaagcgaggaccaagcatgtttagttctgcctacaagaat
tcttttatgtcgcctgtaaagctttccagtgttccaaaaagtgccaatattgaaaaagaa
aggggagcttttccccctcggatagtgactcccgagccaatccggccggttaagtctaaa
tatcagatgcctccagtggatgaacaccagcccattccaagcgggatgaagtcagatgat
cttcctcgaaggattgttggatcacggatagcaagggctatcccagagttcaacaaatcc
aacatgtatgataagcagaatgtgatctgggatgcaggtctaatccatgggcggtcattc
cgtgtagggtggggcccagggtggacacttgctcatgctgggttaactgtcactgacaga
agcacaggagcagaagaaacttctttctccatgttatcaggttcaagaaaaaggaaaatt
ggccaaacaaattggaatgttgctctagagaagctaaatgcgacatcttacttccaacca
gatgacccaatagtagtgcgtaaccacgaagagttgctgtccattcagctggaacatgca
gggagagatgtggaggaggggtgtcctgtctttgcccccagggatggggaggtgtcccta
cagcacatagtggagcgcatcaagcaggacaaaaacgatacagagggacatccagaccat
gccagtgttagctacgcagaaacaatctggaacctgtgtgctgctttgtttggaacgcta
ccagatgacattgtgaataactatgagctacagaatgctaggagagaggcagtttctagg
tggctttcttctacagccagggacaaaatccaaaaagagattcatgaagccaaatacaag
ggaaagaatcacctgcctgctttatttgctcacctgacaggtagacaggtagcagcagcc
tgcagcctgtcccagaagagtggggacacacggctggcattggtcctctcacagtgcatg
ggtagtccctatcccaaacatttactggatatgcagctcaatgaatgggccgagttaggg
gcctacaagtttatagaggagctgagactaaagctgtacgttctccttgctggtcgtatg
gtgtggcagactcctcaatctgtcgtcaacacttgtatggacttggactggaagagggct
tttgcacttcatttatggtacatgtgccctccaactgcaccagcccagatcaccaaagct
ctggaggagtatgaaatgggttgtagtggagattcacccttggggatgtattgtagccct
ccattgccaccatatctagaggaggatcaaatgggggacacagaaaatatccgagatact
gcataccatttgctcaagttatactcggaaaggacctatgcccttgaaagtctttttaat
cctagatcttcaactgcaaatcacatggactatagactcagctggcacctgctgcaggta
ctccagtcagtgcaggcccagtatcgccatctgtcggcctacaacaccacctgtctacac
ctcagcttcgccgctcagctcgagtccatagaaatgtgggagtgggcggtctttgtagtc
ctacatctggaagacagaagaagtcgagagtggaggacgcgagatctgttacacagatat
gtctcggtagaggaagagttcaatgaacaggaagtctttgtcagagaaaagcttggtata
ccagtcgaatggattcactacgcaaaggctctgaaagctcggaatgatagaaatcaccat
gctgaagccgttcacttgctgaactcaaagcgatggaatgagtgtcataaagtcttgctg
tgccatttgtcatcagatgccattattaatgaaaatcatggctacctgcatcgatttctg
gtggagttggccccacatgacaggtgtaagcagatcgtggactggtctgctgggggtcag
gtgttgctggattacatcacactggtcagcaaactggaacaaataaaactagacatcgag
agaaatgagcagggaagaggtgtagctgttgatagtttacggacagacattacatcatta
tgtgacagaatatctaatttaccttgttaccaatccagagacaggctgtgccagtcagag
atatctaagagactgtctgttctcttccacaccattcttaatttacaaggagatcaagac
ctctctgtcagattaatggcaccctacataggacagttaccaatgccagaagattacaga
ctgcaggaactgagtagtttgactcgcaatttctcagccagttatttaaggctataa
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integrated database retrieval system
