Crassostrea angulata (Portugese oyster): 128192045
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Entry
128192045 CDS
T09348
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
canu
Crassostrea angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
canu04054
]
128192045
Pattern recognition receptors [BR:
canu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128192045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
LRR_1
LRR_6
LRR_5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
128192045
NCBI-ProteinID:
XP_052720456
EnsemblRapid:
LOC128192045
LinkDB
All DBs
Position
1:40316210..40318361
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AA seq
709 aa
AA seq
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MLFFQGQLNLLCVAFACVTIFISSGISDHVNCALNYTEFGVKMTYSENDLCVLKDNTTSF
TCNSLNKERSRICLWNLCLKPHETLQTLDLSRNHFKDIPKGCFSEFPSLEILTISNNDQL
GFNNLYNAMYKLNQTNIQMIYANNINQVGVTYPFPKNISLLLNNTSLRKLHLNYNEIQTL
ESGSIYYLPRTLEEISVRGNRLEIGLIFFELVWLIKLTLLDISFQCSTLEYRSRSRRNVQ
YIDDFDNTNYEKCLNDISYVNALKVLPSNLTTLIATGLLSGPNCIPMLSTRRNSKLSHID
ISMDGYFKWVGPISVDPNFNIITTVNLSHNQCQFIKDGFFDNLTHLENLDISYNYLGDYF
YRIESENVFSGLKHLKKLDMRKSNIRYLPKTLLKHNKWIESLVLSDNAMDEWTLDISTLD
SLSYVDCSLNKLVTFPEYVTERLDMLSKDHNVTVDFHHNKILCTCENLHFLQWLFTTRVM
VRLSAACTGYNGNITQAYKYLSKECRKDNSVREWLYPVQTICLLFILSAIAMVVYKKRWT
LIYRWYLFRLRQKGYTPIGGCDEGYHFDAFLSFADEDRPFVERVVTELEENSEVHFKVCI
HYRDFTPGKSISKNIVSSVHSSRKTIVFMSRAYLRSQWCKYELQMAITKERHMDRRLIIM
VVLEDIPHNQLSLEVLQYYKKNSYIVKPKNEQELNLFWKTLKGVIANDL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgctttttttccagggccagctcaaccttttatgcgtcgcgtttgcttgtgtaacgatt
tttatcagcagtggaatttcagatcatgtgaactgcgccttgaactatactgaatttgga
gtaaaaatgacatatagtgaaaacgatctctgtgttcttaaggacaatactacaagcttt
acttgtaacagcttgaacaaggaaagaagtcgtatatgtttatggaacctttgtttaaaa
ccgcatgaaacattgcaaacattggatctatcaagaaaccactttaaagatattcccaaa
ggatgtttcagtgaatttccatctcttgaaattctaaccatatcaaacaacgaccagtta
gggttcaacaatttatataatgcaatgtataagctaaatcagacgaatattcaaatgatt
tacgccaacaatattaatcaagtaggtgtgacctatccatttcccaaaaacatttcattg
cttctcaacaatacatcgcttcgaaaactacatttgaactacaacgaaattcaaacactt
gaaagtggctctatttactatttgcccagaaccttagaagaaatttccgtccgtggaaat
cgacttgaaatcggactcatttttttcgagctggtatggcttataaaacttactctattg
gacatcagttttcaatgctcaaccttagaataccgttctagatcgagaagaaatgtacaa
tatatcgacgactttgataacacaaactatgagaaatgtctaaacgacataagctatgta
aatgctctcaaagtgcttccgtctaacctcacaacattgattgccacgggcttgttatcc
ggaccaaattgcattccaatgttaagtacaagaaggaatagtaagcttagtcatattgac
atttcaatggatggatatttcaaatgggtcggtcctataagcgtcgatccaaatttcaac
attataaccacggtcaatttgtcacacaaccaatgccaatttatcaaggatggatttttt
gacaatttgacacaccttgaaaatttagatatcagctacaattatctgggcgattatttt
tatcgaattgagagtgaaaatgtgttcagcggtctgaaacatttaaagaaattagatatg
agaaaaagtaatattaggtaccttccgaaaacacttttaaagcataataagtggatagag
agtttagtacttagcgataatgctatggatgaatggacgctagatataagcaccctggac
agcttgtcatatgttgactgttctctcaacaaactagtgacctttccagagtatgtcaca
gagagattggatatgctaagtaaagatcataatgtcactgtagattttcatcacaataaa
attctatgtacctgtgaaaacctgcattttctacaatggcttttcacgactcgagtaatg
gttcgtttatcagcagcatgtaccggatataacggaaatataacccaagcatataaatat
ttatccaaagaatgtagaaaggacaatagcgtaagggaatggctgtatccagttcaaact
atttgccttctctttattctatctgccattgccatggttgtgtacaaaaaacgatggaca
ctcatctatcgctggtatttgtttcgtctgagacaaaaaggatacactcccatcggagga
tgcgatgagggttatcactttgacgcgtttctgtcttttgctgacgaagacagaccattc
gtcgaaagagtggtgacagagttggaggaaaattcagaggttcatttcaaagtgtgtatc
cattatagagatttcactccaggaaaatccatttccaagaacatagtatcaagtgtccat
tccagtagaaaaacaatcgtattcatgtcacgtgcctatctcagaagtcagtggtgtaaa
tatgaattacaaatggcgataacaaaggagaggcacatggatcgcagattgataataatg
gtcgtgcttgaagatattccacataatcaactttctcttgaggttctacaatactacaaa
aagaatagttacattgttaaaccgaaaaacgaacaagaactgaacctcttttggaaaact
ttgaaaggcgtcattgcaaatgatttatga
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