Magallana angulata (Portugese oyster): 128192199
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Entry
128192199 CDS
T09348
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128192199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128192199
Enzymes [BR:
canu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128192199
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128192199
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128192199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-C3HC4_2
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
zf-C3HC4
Beta-prop_EML
zf-RING_2
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_WDR75_1st
zf-RING_UBOX
Beta-prop_DCAF4
WD40_like
WD40_RFWD3
zf-C3HC4_3
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
zf-RING_5
Beta-prop_IFT122_1st
zf-C3HC4_4
Beta-prop_DCAF12
Beta-prop_IFT140_1st
RING_XB3-XBAT31
Beta-prop_SCAP
zf-RING_10
zf-rbx1
zf-Nse
Sina_RING
U-box
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
128192199
NCBI-ProteinID:
XP_052720662
LinkDB
All DBs
Position
7:complement(40535853..40544955)
Genome browser
AA seq
618 aa
AA seq
DB search
MANRTTLHQRRRKRAQPPVFSGISGSYEDKDSDFLCPICFNLMEEVHMTKCGHSYCHKCI
KESLQQSNRCPKCTYVIEGIDHVFPNFMLNELVLKYRGKQEQKKIKLEQKTSPSTETVDI
CDMILEDNIDLCDVNKLLEVLNVKKQKLEGDIKFAQKYILKEFLQEIKKRKQGKLEQLKR
EISLIDDDFEKVDGMLSEHRRKYPYIPDHLVPNGFEPTMTASTDPGSQDGFNGSKNAGKP
WLQTTMASRRKRVSQHFEDLEQCYFSIRQKDEYNGEEGLDEFTECLSKFTKFNSFRSLAT
LSYASDIYSGSSIVSSIEFDRDCDFFAIAGVTKKIKVFEYGTVIKDAVDIHYPVNEMICN
SKISCVTWSSYHKNVLASSDYEGTITLWDAFTGQKSKLFQEHEKRCWSVDFNTMDPKLLA
SGSDDAKVKLWSINAENSIACLEAKANVCCVKFNPESRYHLAFGSADHFVHYYDLRNTKE
AVMVFKGHRKAVSYTKFLNTTEIVSASTDSQLKLWNIDKSNSLRTFKGHINEKNFVGLAT
DGDYIACGSENNSLYVYYKGLSKQLMTYKFDTVRSVLQEKDKKEDEVNEFVSAVAWRPGS
NVVVAANSQGTVKVLELI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcggactactttgcatcaacgcagacgaaaacgagcccagcctccagtcttt
agtggaatttctgggtcatacgaagacaaagacagtgacttcctgtgtcctatatgtttt
aacttgatggaagaagtacatatgactaaatgtggtcactcatattgccataaatgcata
aaggaaagtcttcaacaaagcaacagatgtccaaagtgcacttatgttatagagggcatt
gaccatgtctttccaaacttcatgttgaatgagctggtgttaaaatacaggggcaaacag
gaacaaaagaaaataaaacttgaacaaaagacatctccttcaacagaaactgttgatatc
tgtgatatgattttggaggacaacattgatctctgtgatgtgaacaaactgctagaagtc
cttaatgtgaagaagcaaaagctagaaggggacatcaagtttgcacagaaatatatactt
aaagaatttcttcaagaaataaaaaaaagaaagcaaggaaaattagaacagttaaaaagg
gaaatttctttgattgatgacgatttcgaaaaagtggatggaatgctttcagagcacaga
agaaagtatccgtacattccagatcatctggtgccaaatgggtttgagcctaccatgacg
gcaagcactgatcctggcagtcaagatggattcaatggcagcaagaatgctggaaaaccc
tggttacagacaaccatggcctccagaaggaaaagagtcagtcagcattttgaggatcta
gagcaatgttacttctccatcagacagaaggatgagtataatggagaagaggggttagat
gagtttacagaatgtctttcaaaattcaccaagtttaattcattcaggtcacttgccact
ttaagttatgcaagtgacatttacagtgggtccagtatagtctcaagcatagagtttgac
agggattgtgacttctttgccatagctggtgtaaccaaaaaaatcaaggtgtttgagtat
ggaactgtgataaaggatgctgttgatatacattatccagtgaatgagatgatctgcaat
tcaaaaattagttgtgtgacttggagtagttatcacaaaaatgtcctagcaagctcagat
tacgaagggacaattacactgtgggatgccttcactggccagaaatctaaactctttcag
gaacatgagaaaagatgctggagtgtggactttaacacaatggatcccaaactgttggct
tcaggatcagatgatgctaaagtgaagctttggtctatcaatgcagaaaactcaattgcc
tgtctagaagccaaggcaaacgtttgttgtgttaaattcaaccctgagagtagatatcac
ttagcgtttggttctgcagatcattttgtgcattactatgatctgagaaacactaaagag
gcagtgatggtcttcaaggggcacagaaaggctgtgtcatacaccaagttcctcaatacc
acagaaattgtgtctgcatcaacagacagtcagctcaaactttggaatattgataaatca
aattctttgagaacctttaaaggacatatcaatgagaagaattttgtaggcttagctaca
gatggggattatattgcttgtggaagtgaaaacaattccctgtatgtgtactacaagggg
ctttcaaaacagctgatgacctataagtttgacacagtgcggagtgtgctgcaagaaaaa
gacaagaaagaagatgaagtcaatgagtttgttagtgctgttgcttggagaccgggttca
aatgtggttgtagcagctaacagccaaggaacagtcaaggtgctagagttgatatag
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