Crassostrea angulata (Portugese oyster): 128192227
Help
Entry
128192227 CDS
T09348
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128192227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128192227
Spliceosome [BR:
canu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
128192227
Complex C
U4/U6.U5 tri-SnRNP related factors
128192227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
128192227
NCBI-ProteinID:
XP_052720732
EnsemblRapid:
LOC128192227
LinkDB
All DBs
Position
7:complement(50789793..50794417)
Genome browser
AA seq
434 aa
AA seq
DB search
MAPNNPLPNWGNEKTMNMNPLILTNIQASPYFKVNLYELKTYHEVIDEIYYKVDHLEPWE
KGSRKTAGQTGMCGGVRGVGAGGIVSSAYCLLYKLYTLKLTRKQLMGLITHKDSPYIRGL
GFMYIRYCQDPKDMWDWYEPYLDDEEEIDVKAGGGHKMTMGEVLRQWMVKLEWYSTLFPR
IPVPIQKDLMQKLKERPPQAPGYQEEEEEEEEPEPEPEREEPRRPRHIPDGEVSFGEAER
SVQHRRSPEYRRSQNRSSPRRRSRSPRRRRSRSPRRSPGRERARSPYRRRSPHRHSPSRR
RSRSPRNDFARELERERRRQERAKRGDRSRSREKQMGHRSRSKERSRKRSRSRSRDKPRQ
RSRSRSKEQSTLSGSKSHRSRSGSREPKRKKEKKHKHRSRSRERNSKHKSHSKHNRDVEQ
LSPAREEEHAKNAS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcacctaacaatccactcccaaactgggggaatgagaaaacgatgaacatgaatcca
ttgatattgacaaatattcaggcatcaccatacttcaaagtcaatttgtatgagttaaaa
acctaccatgaggttattgatgaaatatactacaaggttgaccatttagaaccatgggaa
aagggaagcagaaaaactgcaggacaaacaggaatgtgtggaggggtaagaggagtgggt
gcgggtggaatagtctccagtgcatactgtttactgtacaagctgtatacgctgaaatta
acacgtaaacagctgatgggattgatcacacacaaggattccccttacatcagaggactg
ggattcatgtacatcagatattgtcaggaccccaaggatatgtgggactggtacgagccg
tacctggatgatgaggaggaaatagatgtgaaggcaggaggaggacacaaaatgaccatg
ggggaggtgctccgtcagtggatggtcaaattggagtggtactctaccttgtttcccagg
atccctgtacccatccagaaggacctcatgcagaagctgaaggagaggccccctcaggcc
ccggggtaccaggaggaagaagaggaggaggaggaacctgagcctgagcctgagagggag
gagccgaggagacccagacacatccctgatggagaggtgtcattcggtgaagccgagaga
agtgtccaacacagaagatctccagaatacagacgttcacaaaatcgatcatcaccaagg
cgaagatcaagatctccaagaagacgaaggtccagatcgccgaggagatctccagggaga
gaaagggcaaggtcaccttacagaagaaggagtccacacagacactccccctccaggaga
cgatcccggtccccaaggaatgattttgctcgggagctggaaagagagcgcaggagacag
gaaagagccaaaagaggtgaccgctcaagaagtagagaaaagcaaatgggtcataggtca
aggagcaaagagaggtcgcgaaaacggtcaaggtcacgaagcagagacaagccaagacaa
agatctcgttcaaggagcaaagaacagtcaacactttcagggtcaaagtcgcatcgttca
aggtcggggtcacgggaaccaaagaggaagaaggaaaaaaagcataaacataggtcaagg
tcgcgggaacgaaactctaagcataaatcacactccaaacataaccgagatgttgaacag
ctctccccagctagagaggaagaacatgcaaaaaatgcttcttga
DBGET
integrated database retrieval system
