Magallana angulata (Portugese oyster): 128192589
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Entry
128192589 CDS
T09348
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128192589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
canu03021
]
128192589
03036 Chromosome and associated proteins [BR:
canu03036
]
128192589
Transcription machinery [BR:
canu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128192589
Coactivators
SAGA/TFTC/STAGA complex
128192589
Chromosome and associated proteins [BR:
canu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128192589
STAGA complex
128192589
TFTC complex
128192589
SAGA complex
128192589
SLIK complex
128192589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD_LRWD1
WD40_like
Beta-prop_WDR35_TULP_N
VPS8_N
WDR54
Motif
Other DBs
NCBI-GeneID:
128192589
NCBI-ProteinID:
XP_052721342
LinkDB
All DBs
Position
7:complement(3612889..3624612)
Genome browser
AA seq
688 aa
AA seq
DB search
MAGNEVPFSDSLKTQANMQQTLPFQNVPKADVSDKQTLLAVLQFLKKNNLKGTEELLKRE
ASIKDDDVRPQTSSQSETDVSHALAAYKSADDPSLFTDYYTDLKTFIESCLDAHKVELSV
ILYPVFIHMYLEMVYNEHESYAILFFRRFSKEQEDFYQEDLQKLATVTKKEHMKGNELME
SFKASKFVIKMSRDSYNHLKRYLQENKMKPLLNIIQEHLFIDVFDGVPRTKQQIDATSGA
LLGESERDANKVKVFYGLLKEPDINMPLEEEDEPPEGEDKPKKKKPKKDPLMMKKSKNDP
HAPAFNRIPLPEMKDQDKMEKITAYREALKRVKVGRDNPPTICFYTVLNSYQGVTSIDMS
EDSSLLCAGFGDSTIRVFTTSSHKLRSMKTAAELDNIDRDADDVLERMMDDRSATDSKLL
TGHSGPVYAARFSRDRKYLVSCSEDGTVRLWSLLTWTNLVCYKGHNHPVWDVEFSPYGHY
FVSVGHDRTARLWATDHHVPIRIFSGHLSDMDCVKFHPNSNYIATGSNDRFIRLWDILNG
NCVRLFSGHKGSVQALCFSPDGRFLASSGVDSVVLLWDIATGGLMAQMKGHTDTVYSLCF
SRDGGVLASGGLDNSVKLWDVIKVLQEVDTDADTSIPSSVHVNDSTGLLIGSWATKATPV
LCIHFTRKNLMIASGPAALTEEKSPHKT
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaacgaagttccgttttcagattcactcaaaacacaggcgaatatgcagcaa
actctaccctttcagaatgtcccaaaggcagatgtttccgacaaacaaacactcttagca
gtattgcagtttttgaagaaaaataatttgaagggaacagaagaattattgaaaagagag
gcttccataaaagatgatgacgtccgcccgcaaacctcttctcaatcagaaactgatgtt
tcgcacgcattggcagcctacaaaagtgctgatgacccaagtctgtttacggactattat
acagatctaaaaacattcatagagtcctgtttggatgctcacaaggttgagctgtctgtt
attctttatccagtgttcatccacatgtatcttgaaatggtctacaatgaacatgaatcc
tatgctattttattcttccggcggttctccaaagaacaagaagatttttatcaggaagac
ttacaaaagttagcaactgtcactaaaaaagaacacatgaaagggaacgaacttatggag
agttttaaagccagtaagtttgtgatcaagatgtcccgagattcgtacaaccacctgaag
cgctatctccaggagaacaaaatgaagcccttgttaaacatcattcaggaacacttgttt
attgacgtatttgatggagttccgagaaccaaacaacagattgatgccaccagtggggca
ttgttgggagagagcgaaagagacgcaaacaaagtgaaagtattttacggccttctaaaa
gaaccagacatcaacatgccattggaggaagaagatgaacccccagagggggaggacaag
ccaaagaaaaagaaaccaaagaaggatcctctgatgatgaagaagtctaaaaacgatccc
cacgctccggcattcaacagaatcccactacctgaaatgaaagatcaggataagatggag
aaaataacagcttacagagaagccttgaaaagagtaaaagttggcagagacaatcccccc
acaatatgtttctacactgtcctcaattcatatcaaggagtgacatctattgacatgtcg
gaggactccagcctgctttgtgctgggtttggagattccaccattcgagtcttcaccacc
tccagccataaactcagaagtatgaagaccgctgcagaactagataatatagacagggac
gcagatgatgttttggagaggatgatggatgacaggtcggcgacggacagtaaactcctg
acaggtcatagtggcccggtctatgccgcccgcttcagtcgtgacaggaagtacctagtg
tcttgctccgaggacggcacagtgagactgtggagtttgctgacttggacaaaccttgtt
tgctataaaggacacaaccaccctgtgtgggacgtagagttcagtccgtatggccattac
tttgtgtcggtcggacatgacaggacagctcggctgtgggccaccgaccaccacgttcca
atcagaatattctcaggacatctctccgacatggactgtgtgaagtttcatcccaattcc
aactacattgctacaggatccaatgaccgcttcatccgcctgtgggacatcctcaatggt
aactgtgtgcggctcttctccgggcacaagggatccgtgcaagctctgtgtttctcaccg
gacggaaggtttctggcatcctctggggtggacagtgttgtactactctgggatattgcg
actgggggattgatggctcagatgaaaggtcacacagacacagtgtacagtctgtgcttc
agtcgagatgggggagtgctggcatcgggtggtctggacaacagcgtcaaactgtgggat
gtgattaaggtgctacaggaagtggatacggacgcagacaccagcatacctagctctgtc
cacgtgaatgacagcacgggtctcctgattggttcctgggctaccaaggccacgcccgtt
ctctgtattcacttcacccgcaagaatctgatgatagcaagtgggcctgctgctctcaca
gaggaaaaatctccccacaaaacatga
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