Cellulophaga algicola: Celal_0600
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Entry
Celal_0600 CDS
T01404
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cao
Cellulophaga algicola
Pathway
cao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Celal_0600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cao03021
]
Celal_0600
03400 DNA repair and recombination proteins [BR:
cao03400
]
Celal_0600
Enzymes [BR:
cao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Celal_0600
Transcription machinery [BR:
cao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Celal_0600
DNA repair and recombination proteins [BR:
cao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Celal_0600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
ADV47939
UniProt:
E6XCG4
LinkDB
All DBs
Position
complement(700075..701067)
Genome browser
AA seq
330 aa
AA seq
DB search
MALFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSIRVD
KVEHEFSVISGIVEDVTEIILNLKQVRFKRQIEDVDSETVSVSVSGKNQLTAGDFQKFIS
GFQVLNPDLVICNMDAKVNFNMELVIEKGRGYVPAEENKKSGAPIGTIAIDSIFTPIKNV
KYSIENFRVEQKTDYEKLVFEIESDGSITPKDALTEGAKVLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVINKGLSFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattatttaattttcaaaaacctgataaagttataatgattgattcgacagatttc
gaagggaagtttgaattccgccctttggaacctggttatggattgactgttggaaatgct
ttaagaagagttttactatcttctttagaaggttttgcaattacttctattcgtgtagat
aaagtagagcatgagttctctgttatatcaggaatcgtagaagatgtaactgaaataatt
cttaatttaaagcaagttcgttttaaaagacaaatagaggacgtagattctgaaactgtt
tcagtttcagtaagcggtaaaaatcaacttacagctggagactttcagaaatttatttct
ggatttcaagtattgaatcctgatttagtaatctgtaatatggatgctaaagttaacttc
aatatggagttagttattgaaaaaggaagaggatatgttcctgctgaagaaaataaaaag
tctggagcaccaattggtacaatcgcaattgattctatttttacacctattaaaaatgta
aaatatagtattgaaaactttcgtgtagaacaaaagactgattacgaaaaattagttttc
gaaattgaatctgacggatctattacaccaaaggatgcattaacagaaggtgctaaggtt
ttaattcatcactttatgttattctctgatgagcgtattactttagaagctgatgaaatt
gcacaaactgaaacttatgacgaggagtccctacacatgcgtcagttattaaaaacaaaa
ttagtagatatggatctttcggttcgtgctctaaattgtttaaaagctgcggaagtagat
actttaggagacttagtttcttttaataagaatgatttaatgaagtttagaaacttcggt
aaaaaatcattgacagagctagaagaacttgtaatcaataaaggtttaagtttcggtatg
gatttgtcaaaatataaattagataaagattaa
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