Cellulophaga algicola: Celal_2241
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Entry
Celal_2241 CDS
T01404
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cao
Cellulophaga algicola
Pathway
cao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Celal_2241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cao03019
]
Celal_2241
03016 Transfer RNA biogenesis [BR:
cao03016
]
Celal_2241
Enzymes [BR:
cao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Celal_2241
Messenger RNA biogenesis [BR:
cao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Celal_2241
Transfer RNA biogenesis [BR:
cao03016
]
Prokaryotic type
tRNA degradation factors
Celal_2241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
ADV49534
UniProt:
E6X5Z2
LinkDB
All DBs
Position
complement(2554864..2557107)
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AA seq
747 aa
AA seq
DB search
MIPKVFKEVIDLGDGREISIETGKLAKQAHGSVVVQSGNCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDENVMPEAMAGLAASAAIQLSDFPFECAISEARVARVNGEFVINPTRAQLAESDLEMMI
GASADSVMMVEGEMDEISEEVMADAIKFAHEAIKVQIAAQLRLAEAFGKKETREYATAEV
NEELEKRIHDLAYDKCYAIAKKGTSKAERTNAFAEVKEEVKASFTEEEMAEFGHLVGGYY
RKAEKEAVRELTLSEGLRLDGRKTDEIRPIWCEIDYLPSTHGSAIFTRGETQALATVTLG
TSRDANKIDMPSFEGEENFYLHYNFPPFCTGEARPLRGTSRREVGHGNLAQRGLKGMIPS
DCPYTVRVVSEVLESNGSSSMATVCAGTMALMDAGVKMKRPVSGIAMGLISDGDRYAVLS
DILGDEDHLGDMDFKVTGTSEGITACQMDIKIKGLSYEILVNALKQARDGRLHILGKITD
TISTPAEDVKPHAPKMVTRRIPNEFIGALIGPGGKVIQEMQKETGTTIVINEDPVTEEGI
VEILGVGQEGIDAVLAKIDSILFKPELGKSYEVKVIKMLDFGAVVEYAEAPGNEVLLHVS
ELAWERTENVSDVVNMGDVFEVKYFGVDPKTRKEKVSRKALLPKPEGYVARPPRESNDRG
RDNRGRDNRGRDNRQDDRKPRGDKKED
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtatttaaagaggttattgaccttggggacggtagagaaatttctatc
gaaactggaaaattagcaaaacaggcacatggttctgttgttgttcaatctggaaactgt
atgttattatgtactgtagtttctaattacaaacaaagcgatgtggactttcttccactt
actgtagactacagagagaaatttgcagctgcaggtcgttaccctggtggtttcttcaaa
agagaagcaagaccaagtgatggtgaggtattaacaatgcgtttagtagaccgtgtttta
cgtcctttattcccaaaagattaccacgcagagacacaagtgatgattcagttaatgtct
catgatgaaaatgttatgcctgaagctatggctggtttagctgcttctgctgcaatccaa
ttatcagatttcccttttgaatgtgctatctctgaagctagagttgctcgtgtaaatgga
gaatttgtaattaacccaacccgtgctcaattagcagaatctgatttagaaatgatgatt
ggtgcttctgctgattctgtaatgatggttgaaggtgaaatggatgagatttctgaggaa
gtgatggcagatgctatcaagtttgctcatgaagctattaaagttcaaattgctgctcaa
ttacgtttagctgaagcttttggtaaaaaagaaactcgcgaatacgctactgcagaagta
aacgaagaactagaaaaaagaatacacgatttagcttacgataaatgttatgctattgct
aagaagggaacttctaaagcagagcgtacgaatgcattcgctgaagtaaaagaagaagta
aaagcatcttttaccgaagaagaaatggcagaatttggtcaccttgtaggaggttactat
agaaaagctgaaaaagaagcagttcgtgaattaaccttaagtgaaggtttacgtttagac
ggtcgtaagactgacgaaattagaccaatctggtgtgagatagattacttaccgtctaca
cacggttctgctatatttacacgtggggaaactcaagctttagcaaccgtaactttaggt
acttctagagatgctaacaaaatagatatgccctcttttgaaggtgaagaaaatttctat
ttacattataacttccctcctttttgtactggtgaagctagacccctaagaggaacttct
agaagagaagttggtcatggtaacttagcgcaacgtggtttaaaaggaatgattcctagt
gattgtccttatacggtacgtgttgtttctgaagtgttagaatctaacggttcttcttct
atggcaacggtttgtgctggtacaatggctttaatggatgctggtgttaaaatgaaacgt
cctgtttctggtatagcaatgggattaatttctgatggtgatcgttacgccgtattgtct
gatattttaggagatgaagatcacttaggagatatggactttaaagtaactggtacttct
gaagggattactgcttgccaaatggatattaaaattaaaggcttatcctacgaaatttta
gtgaatgcattaaaacaagctcgtgatggtcgtttacatattttaggcaagattacagat
actatttctactccagctgaagatgtgaaaccacatgctccaaaaatggttacgagacgt
attcctaacgaattcattggtgctttaattggcccaggtggaaaagttattcaggaaatg
caaaaagaaactggaactactattgttataaacgaagatccagtaactgaagaaggtatt
gttgaaattttaggtgtaggacaagaaggtattgatgctgttttagcaaaaatagattct
atcttattcaagcctgaacttggtaaatcttacgaagtgaaagtaataaaaatgttagat
tttggtgcagtagtagaatatgcagaagctccaggaaatgaagttttattacatgtatct
gaactagcttgggaacgtacagaaaatgtttctgacgttgttaatatgggagatgtattt
gaagtgaagtatttcggtgtagatcctaaaactcgtaaagagaaagtatctcgtaaagct
ttattaccaaaacctgaaggttatgtagcaagaccaccaagagagagcaacgatcgtggt
cgtgacaatagaggtagagataatcgcggacgtgacaaccgtcaagacgatagaaaacca
agaggagataaaaaagaagattaa
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