Cellulophaga algicola: Celal_2673
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Entry
Celal_2673 CDS
T01404
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cao
Cellulophaga algicola
Pathway
cao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Celal_2673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cao03019
]
Celal_2673
03400 DNA repair and recombination proteins [BR:
cao03400
]
Celal_2673
Enzymes [BR:
cao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Celal_2673
Messenger RNA biogenesis [BR:
cao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Celal_2673
DNA repair and recombination proteins [BR:
cao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Celal_2673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
Helicase_Sgs1
HTH_40
Peptidase_C36
Motif
Other DBs
NCBI-ProteinID:
ADV49958
UniProt:
E6XB94
LinkDB
All DBs
Position
3083001..3085202
Genome browser
AA seq
733 aa
AA seq
DB search
MSLSEIDLHSSLKKYFGFSEFKGLQESVITSILEGKNCFVVMPTGGGKSLCYQLPALMQE
GTAIIVSPLIALMKNQVDAIRGISSEHGIAHVLNSSLTKTEIKQVKSDITSGITKLLYVA
PESLTKDEYVEFLQSVKLSFVAVDEAHCISEWGHDFRPEYRNLRSIISRLDDTIPIIGLT
ATATPKVQEDIIKNLGITDADLFKASFNRPNLFYEVRPKTQNIEADIIRFVKQNTGKSGI
IYCLSRKKVEELAQILQVNGVSAVPYHAGFDTKTRSKYQDMFLMEGVDVVVATIAFGMGI
DKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQ
EIGNALLQEMVAYAETSMSRRKFILHYFGEHFDDVTGDGALMDDNTKNPKQKEEAKDDLV
KVIQVVQGTMEKFKSKEIVKVLTGKVNAIIASHKTDEKPFFGIGDDRDKEHWMALVRQGL
VAGYLRKEIEQYGILHVTPKGAEFAKNPVSFMMTKDHVYNQAADDAIVSAAKSSGGVTDE
ALLKVLKDLRKKQGQKLEVPPFVIFQDPSLQDMALKYPITLEELVNIHGVGEGKAKKYGK
PFVDFIKKYVEENDITRPDDLIVKSTGANSALKLYIIQNVDRKLPLDDIASAKGIAIPEL
IKEMEQIVYSGTKLNITYWVDDVLDEDQQEELHDYFLEADSDNIDLALKEFDGDYEDEDL
RLYRIKFISEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgagtgaaattgatttgcattcctcactaaaaaaatattttggattttcagag
ttcaaaggacttcaagaaagtgtaattacaagtattcttgagggtaaaaattgttttgtt
gtaatgccaaccggcggtggaaaatcgctttgttaccaacttcctgcattaatgcaagaa
ggtactgcaataatagtttccccacttattgcgttaatgaaaaaccaagtagatgccatt
cgtggtatttcgtcagaacatggcattgctcatgttttgaattcttcattaacaaaaaca
gaaataaaacaggtgaaaagcgatattactagtggtatcactaaattgctttatgtagca
ccagaatcattgactaaagacgagtatgttgagtttttacaatctgtaaaactatcattc
gttgctgttgatgaggcgcactgtatttctgaatggggtcatgattttagacctgaatat
cgaaatttaagaagtattattagtcgtttagatgatacaattcctattataggacttacg
gcaactgcgacccctaaagtgcaggaggatattataaaaaatttaggtattacagatgct
gatttatttaaggcatcatttaataggcctaatttattttatgaagtacggcctaaaacc
caaaatatagaagcggatattatacgttttgtcaaacaaaatactggtaaatcgggtata
atttattgtctgagtaggaaaaaagtagaagagttagctcaaatactacaagtaaatggc
gtaagtgcggtaccatatcacgctggttttgatactaaaacacgatcaaaatatcaagat
atgttcttgatggagggtgtagatgttgtggtggcaaccattgctttcggtatggggata
gataaaccagatgttaggtttgttattcaccatgatattcctaaaagtatagaaagttat
taccaggaaacgggtagagcaggtagagatggtggtgaaggtcattgcttggctttttat
tcttataaagatattgagaagttagaaaaatttatgtctggaaaacctgttgccgaacag
gagattggtaatgcattgttacaagaaatggtagcttatgcagaaacttctatgtctagg
agaaagtttattctgcattattttggggaacattttgatgatgtgacaggagatggagct
ctaatggatgacaatacaaaaaatccgaaacagaaagaagaagctaaagatgatttggtt
aaagtgattcaagtggtacagggtaccatggaaaaatttaaatctaaagaaatcgtaaaa
gtacttacaggaaaagtaaatgctattatcgcttcacataagacagatgaaaaaccattt
tttggtataggagacgatagagacaaagaacattggatggcattagtgcgccaaggtttg
gtagctgggtatttgcgtaaagaaattgagcaatacggaatactacatgtgacacctaaa
ggggcagaatttgcaaaaaatccagtttcttttatgatgacgaaggatcatgtgtacaat
caagcagcagatgatgctattgttagtgccgcaaaaagtagtggtggcgtaacagatgaa
gctttgcttaaagtgttaaaagatcttagaaagaagcaaggtcagaaattagaagtccct
ccttttgttattttccaagatccatctttacaagatatggcgctaaagtatcctataact
ttagaagaacttgtaaatattcatggagtaggagaaggtaaagcaaaaaaatacggaaag
ccttttgtagattttattaaaaaatatgtcgaggagaatgatattactcgccctgatgat
ttaatcgttaagagtacaggagccaattctgctttaaaattgtatatcatccagaatgta
gatcgtaaactacctttagatgatattgcttcggcaaaaggaatcgctattcctgagttg
ataaaagagatggaacaaattgtgtatagtggtaccaaactaaatattacctattgggta
gatgatgtactagatgaagatcagcaagaagaactgcatgactactttttagaagcagat
tctgataacatagatttagccttaaaagagtttgatggcgattatgaagatgaggatctt
agattgtatcgcatcaaatttattagtgaagtagccaattaa
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