Cellulophaga algicola: Celal_3774
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Entry
Celal_3774 CDS
T01404
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cao
Cellulophaga algicola
Pathway
cao03420
Nucleotide excision repair
cao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Celal_3774
03430 Mismatch repair
Celal_3774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cao03400
]
Celal_3774
Enzymes [BR:
cao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Celal_3774
DNA repair and recombination proteins [BR:
cao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Celal_3774
MMR (mismatch excision repair)
Other MMR factors
Celal_3774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADV51023
UniProt:
E6XAR1
LinkDB
All DBs
Position
4326514..4328898
Genome browser
AA seq
794 aa
AA seq
DB search
MLAIMVKFTVPKNSNKKQLEKYINQLNDAQRAPVLHKDGPLIVIAGAGSGKTRVLTYRIA
YLMSLGIDSFNILALTFTNKAAREMKARIAAIVGNAEAKNLMMGTFHSVFARILRYDGDK
LGYPSNFTIYDTQDSQRLIASIIKEMGLDKDVYKYKQVQNRISSYKNSLITVRAYFNDAE
LQEADAMAKRPRMGDIYQNYVDRCFKAGAMDFDDLLLRTNELLNKFPEVLAKYQDRFRYI
LVDEYQDTNHSQYLIIKALSDKFQNICVVGDDAQSIYSFRGANISNILNFQKDYDNVVMY
RLEQNYRSTRNIVNAANSIIAKNTNQLEKVVWTDNDDGPAIKVHRSTTDAEEGRFVAGSI
FENRMQHQMSNGSFAVLYRTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLYYLR
LVINPKDEEALKRVINFPARGIGMSTLDKLTVAANHYGRSIFEVIENLDRINLKINAGTK
RKLVDFTNMIKGFQIMNETVNAFEISEHVTKKTGILLEFKKDGTPEGIARMDNIEELLNG
IKDFVEGQKEVVDATGNISEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPHVYIV
GMEEDLFPSGMSMSTRSELEEERRLFYVAITRAEKQAYLTYTQNRYRWGKLIDAEPSRFL
EEIDEKYIENLTPIDNPGYRYKSMIDTDIFGEVDKSRLRQIKPTSGIPPSTAKPNENQLR
KLRKLKPELAQPIGNTNTVDPNLAEGSLINHTRFGRGTVVKIEGVGNDRKAEIQFDGAGI
KKLLLRFAKLEIIG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaattatggttaaattcacggttccaaaaaattcaaataaaaaacagttggaa
aaatatataaatcaattaaatgatgctcaacgagcaccagttttacataaagatggaccg
ttaattgttattgctggtgcaggatcgggaaaaacacgtgtattaacgtaccgaattgct
tatttaatgagtttaggaatagactcattcaatattctggcattgacattcaccaacaag
gctgctcgagaaatgaaagctaggattgctgctattgtaggtaatgctgaagcaaagaac
ttaatgatgggaactttccactcggtttttgctagaatattacgttatgatggtgataaa
ttagggtatcccagcaattttacaatttatgatacgcaagattctcaacgtttaatagct
tctatcatcaaagaaatgggacttgataaggatgtatacaaatacaaacaagttcaaaat
agaatatcctcctataagaatagccttattacggtaagagcctattttaatgatgctgaa
ttacaagaggcagatgcaatggctaaacgcccaagaatgggagatatctatcaaaattac
gtagatagatgttttaaagcaggagcaatggattttgatgatttattgttgagaactaat
gagttactaaacaaatttccagaagttctagccaaatatcaagaccgttttaggtatatt
ttggtagatgagtaccaagatacaaatcattctcagtatctaattattaaagcattatca
gataagtttcagaatatttgtgtggtaggagatgatgctcaaagtatttattcatttcgt
ggcgccaacattagtaatattttaaattttcagaaagattatgataatgtagttatgtac
cgtttggaacaaaattatcgttctacacgaaatattgtaaatgcggccaattctatcatt
gcaaaaaatacaaatcagctagaaaaagttgtttggacagataatgatgatggtcctgct
ataaaagttcacagaagtactacagatgccgaagaaggtaggtttgttgcaggttctatt
tttgaaaaccgcatgcaacaccaaatgtctaacggaagttttgcggtactttatcgtacc
aattcacaatcaagagccatagaagatgctttgcgtaaacgcgatattccttaccgtatc
tatggcggattatcattctatcaaagaaaagaaattaaagatgtactttattatttgcga
ttagtaattaatcctaaagatgaagaagcattaaaacgggtcataaattttcctgcacgc
ggaataggtatgagcaccttagataaactgactgtagcggctaatcattatggacgatct
atttttgaagtaattgaaaatttagaccgaataaacttaaaaataaatgccggtaccaaa
agaaagttagtagatttcaccaacatgattaagggttttcaaatcatgaatgaaactgtt
aatgcttttgaaatatcggaacacgttactaaaaaaactggaattctcttagagtttaaa
aaagatggtacccccgaaggtattgcccgaatggacaatatagaggagcttttaaatggt
ataaaagattttgttgaaggacaaaaagaagtagtagatgctaccggaaatattagtgaa
ttccttgaggatgtagccctagctacagatttagataatgatactggtgatgatgaccgg
gtggcattaatgacaattcacttggcaaaaggactagaatttccccatgtatatattgtt
gggatggaagaagatttattcccttctggtatgagtatgagcactcgtagtgagttagaa
gaggagcgaaggttgttctatgttgccattaccagagcagaaaaacaagcttatttaacg
tatacacagaataggtaccgttggggtaaattaattgatgctgaacctagtcgcttttta
gaagaaattgatgagaaatatattgaaaatttaacccctatagataatcctggataccgt
tataaatctatgattgatacggatatatttggagaggtagataaaagtagacttcgtcaa
attaaacctaccagtggtattccaccaagtacggctaaaccaaatgaaaatcagcttaga
aaattaagaaaattaaaaccagaattagcacaacctattggtaatacaaatactgtagat
cctaatttagcagaggggagcttaattaatcatactcgttttggtcgtggtaccgttgta
aaaatagaaggtgttggtaatgaccgtaaagcagaaattcaatttgatggtgcagggatt
aaaaaactgcttctccgttttgctaaactagaaataattggttaa
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