Caldilinea aerophila: CLDAP_02650
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Entry
CLDAP_02650 CDS
T01797
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cap
Caldilinea aerophila
Pathway
cap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLDAP_02650 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cap03019
]
CLDAP_02650 (recQ)
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_02650 (recQ)
Enzymes [BR:
cap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLDAP_02650 (recQ)
Messenger RNA biogenesis [BR:
cap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLDAP_02650 (recQ)
DNA repair and recombination proteins [BR:
cap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLDAP_02650 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
HTH_28
ResIII
Cas3-like_C_2
HTH_23
HTH_38
Helicase_Sgs1
HTH_24
DUF6961
HTH_7
HTH_psq
DUF4566
HTH_5
Motif
Other DBs
NCBI-ProteinID:
BAL98304
UniProt:
I0HZ67
LinkDB
All DBs
Position
complement(356128..358413)
Genome browser
AA seq
761 aa
AA seq
DB search
MAPKLNSEQTLHPSLASVGLSQAQNLLKVFFGYEEFRPPQDQVIASVLAGRDTLAIMPTG
SGKSICYQIPALIFDRFTLVVSPLIALMQDQVEQLCQLGIPAVYLNSTLDYHTYTATLAS
IRSGEVKLVYMSPETLLRPEIMVMLEKYPPALFAIDEAHCISEWGHDFRPEYRQLLGARR
RFSQAICLAVTATATPRVQEDIKQILGFGESQTYIASFNRANLYLSVRPRGSGKGIRELL
RFLEKHKGESGIVYCNTRRQVDDLVERIQKEGFSVVAYHAGLEPETRTANHRRFLNEDGC
IAVATIAFGMGVNKPDVRFVVHYTMPASIEQYYQQIGRAGRDGLPASCLLLYHPQDLITH
YFHIEKGAAKQRPGRVARLQAMERFVRTIECRRIPLLTYFGETPKETKCQACDNCLTGSD
AIPKIDVTIQAQKFLSCVKRTGERFGIGYVIDILRGSRRREIIAQRHHQLSTYNIGKEHS
VQVWRQLAQEFILQGLLDQDLEHGSLRLTESGWAVLRKQQSVTVPAEILSGMSTSDKPTG
DKAQAKDSHVNRLFARLRTLRRSLADELNVPAYVIFPDRTLLDMATRMPRSLEEMRSIYG
MGERKLSRFGELFLACIHNFCQEEAVTSREQVASHRSRPVKRRFEEIGERFQAGYTLADL
QDLFGINRSTILRHLRRYQQAGHSLDPTRLLAESELDPVIRRGVLRRLAGETVLSPLFEE
FGGLVSYDELHLLRLYLECRRKQDEQATFEASAEERQHYAR
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
gtggctccgaaactaaactctgaacaaacgttgcatccctctttagccagcgttggcctg
agccaagctcagaatctattgaaggtcttcttcggctacgaagagtttcgcccaccgcaa
gatcaagtgatcgccagcgtgctcgcaggtcgagatacgctggcaattatgccgacaggc
agcggcaagtcgatctgttatcaaattcctgccttgattttcgatcgcttcaccctggta
gtttcgccgttaattgcgctgatgcaagatcaggttgagcagctttgtcagctaggcatt
cctgctgtgtatcttaacagcacgctcgactaccatacctacacagccacgctcgcctct
attcgcagcggagaagttaagctggtctatatgtctcccgaaaccttgttgcgcccggaa
atcatggtgatgcttgaaaagtacccgccagcactgtttgccatcgatgaagcgcattgt
atatcagaatgggggcatgattttcggccggagtatcggcagcttcttggtgcacggcgc
cgtttttctcaggctatctgcctcgctgtcaccgctaccgctacacctcgcgtgcaggag
gatattaaacagattctcggctttggcgagagccagacatatattgccagcttcaaccgt
gctaacctctatttgagcgtgcgtccgcgcggaagcggaaaaggaatccgagagttactg
cgatttttggaaaaacacaaaggtgagtctggaatcgtctattgcaacacacgcagacag
gtggacgatctcgttgaaaggatacaaaaagaaggtttttctgtcgttgcttatcatgcc
ggtttagagccagagacgcggactgcaaaccatcgtcgtttcctcaatgaagacggctgt
attgcggtggcgacgatcgcttttggtatgggtgtcaacaagccagatgtgcggtttgtc
gtacactacacaatgccagcgagcatcgagcaatactatcagcagattggccgtgcaggt
cgcgacggtttgcctgcctcttgtttgttactttatcatcctcaggatttgatcacccat
tacttccatattgaaaagggagcagccaaacagcgtcctgggcgggtagctcgcctgcaa
gcaatggaacgttttgtacgtacgattgaatgtcggcgtatcccgctattgacctacttt
ggcgagacgccaaaagaaacaaagtgtcaggcttgcgataactgtctaaccggcagcgac
gcaatccccaaaattgatgttaccattcaggcgcagaaatttctctcatgcgttaaacgc
acgggcgaaagatttggaattggttatgtgatcgatatcttgcgcggttccagacgtcgt
gaaattattgcgcaacggcatcatcaactttccacctataatattggcaaggaacattcc
gtacaggtgtggcgtcaactcgctcaagaatttatattacaaggattgttggaccaggat
ctggaacacggcagccttcgcctgaccgaatcaggatgggcggtgctgcgcaaacagcag
tcggtcactgtgccggccgaaatcctgagcggcatgtccaccagtgataaacccactggt
gacaaagcgcaagccaaagatagccatgtgaaccgtctcttcgcccgcctgcgtaccctg
cgcaggtccctggcggatgaattgaatgttcctgcctatgtaatctttcccgaccggacg
ctgctcgatatggcgacgcgtatgcctcgctcacttgaagagatgcgctcaatctatggc
atgggagaacgaaagttgagtcgcttcggagagctgttccttgcatgtatacacaacttc
tgccaggaggaggcagtcacttctagagagcaggtggcaagccatcgctccaggccggtg
aagcgtcgttttgaggaaatcggcgaacggtttcaggcgggctacacccttgcagatttg
caggatctattcggaatcaatcgttccaccatcctacgacacttgcgccgctaccagcag
gccggccattctcttgacccgacacgcctgttggcagagtcggaacttgacccggtgatt
cgtcgcggcgttttgcgtcgccttgccggggaaacagtgctatctccactctttgaggag
tttggtggtttggtctcatacgatgagttgcacctgcttcgcctgtatctggagtgccgt
cgtaagcaagatgaacaggcgacatttgaggcatcggcagaggagcgtcaacattacgca
cggtaa
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