Caldilinea aerophila: CLDAP_03830
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Entry
CLDAP_03830 CDS
T01797
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cap
Caldilinea aerophila
Pathway
cap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLDAP_03830 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cap03021
]
CLDAP_03830 (rpoA)
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_03830 (rpoA)
Enzymes [BR:
cap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLDAP_03830 (rpoA)
Transcription machinery [BR:
cap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLDAP_03830 (rpoA)
DNA repair and recombination proteins [BR:
cap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLDAP_03830 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
WHD_GTF3C1
Motif
Other DBs
NCBI-ProteinID:
BAL98422
UniProt:
I0HZI5
LinkDB
All DBs
Position
complement(497818..498810)
Genome browser
AA seq
330 aa
AA seq
DB search
MVLPKIEVEASSQNYGHFVISPLESGYGITLGNALRRVLLSSLPGAAVTSIRVSGIHHEF
SSIPHVREDMTRLILNVKQIRFRSHTDEPVRIHVEVSSEGPVTAGDLNCPPEIEVVNPDQ
YLLTADSNDVDLDIEMIVSKGRGYSPAEERGRLPLGEIPVDAIYSPVRKAAYRVERTRIG
QQTDYDKLHLEIWTDGSITPEKALRDAANLLIQHFSLLAGTEVTVIEKQEESAEGIPMRV
FEAPIEELELTVRAYNCLKRAGITKVGEILKRMEKGEDEMLAIRNFGKKSLDELVEKLRE
KGYLNVPGVDLSAYTTGVYKPLAVDEDTEA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggttttacccaaaattgaagttgaggcaagctcccagaattacggccattttgtcatt
agtccactggaaagcggctatggcatcacgctggggaatgcactgcgtcgcgttctgctg
tcgagcttgccaggcgcagccgtcacttcgattcgcgtcagcggaattcaccatgagttt
tcgtccattccgcacgtgcgcgaggatatgacgcggttgattttaaatgtgaaacagatc
cgtttccgctcccacacggatgagcctgtgcgcattcatgtggaagtgtcaagcgaaggg
cctgttacggcaggcgacttgaattgtccgccggaaatcgaggtcgtcaaccccgatcag
tatttactgaccgcggactcgaacgatgtagacctggatatcgaaatgattgtttccaaa
gggcgcggatatagcccggcggaggagcgaggacgtctgccgcttggtgaaattccggtc
gacgcaatttacagccctgtgcgcaaagccgcgtatcgagtcgagcgcacgcgcatcggg
caacagacagactacgacaagctccacctggagatctggacagatggctcgattacgccg
gaaaaagctttgcgcgacgcggcgaatctgctcatccaacatttctcgctgctggcggga
acagaggtgaccgtcatcgaaaagcaagaggagagcgccgaagggatccccatgcgcgtc
tttgaggcgccgatcgaggaactcgagttaaccgtgcgcgcctataactgcctgaagcgc
gccggaattacgaaggtcggcgaaattctcaagcgtatggaaaaaggtgaggatgaaatg
ttggccattcgcaacttcggcaagaaatcactggacgaactggtcgagaagttgcgcgag
aagggctacctgaacgtgccgggcgtcgacctcagcgcttacaccactggagtatacaag
ccacttgctgtcgacgaagacacggaagcatga
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