Caldilinea aerophila: CLDAP_06600
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Entry
CLDAP_06600 CDS
T01797
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cap
Caldilinea aerophila
Pathway
cap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLDAP_06600 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cap03019
]
CLDAP_06600 (groL)
03110 Chaperones and folding catalysts [BR:
cap03110
]
CLDAP_06600 (groL)
03029 Mitochondrial biogenesis [BR:
cap03029
]
CLDAP_06600 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cap04147
]
CLDAP_06600 (groL)
Enzymes [BR:
cap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CLDAP_06600 (groL)
Messenger RNA biogenesis [BR:
cap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CLDAP_06600 (groL)
Chaperones and folding catalysts [BR:
cap03110
]
Heat shock proteins
HSP60 / Chaperonin
CLDAP_06600 (groL)
Mitochondrial biogenesis [BR:
cap03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CLDAP_06600 (groL)
Exosome [BR:
cap04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CLDAP_06600 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CLDAP_06600 (groL)
Exosomal proteins of breast cancer cells
CLDAP_06600 (groL)
Exosomal proteins of colorectal cancer cells
CLDAP_06600 (groL)
Exosomal proteins of bladder cancer cells
CLDAP_06600 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Radical_SAM
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
BAL98699
UniProt:
I0I0B2
LinkDB
All DBs
Position
822734..824365
Genome browser
AA seq
543 aa
AA seq
DB search
MAKQIIYEDEARRALKAGVDALANAVKTTLGPKGRNVALDKKWGSPTVTHDGVTVAKEIE
LKDPFENMGAQLLKEAATKTNDVAGDGTTTATVLAQAIVNEGLKNVTAGANPMLLKRGIE
AGRDAVVAALKEMATPVAGKEEIAQVASISAADQTIGNLIAEVMEKVGKDGVITVEESKG
LQFETEYVEGMQIDRGYLSPYFVTNAERMEAVVEDPYILITDKKISSAQDIVPTLEKLVQ
IGKRDIVVIAEDVDGEALATLVLNKLRGMVNALAVKAPGFGDRRKAMLQDIAILTGGQVI
TEELGRKLDSVKLEDLGRASRVVSTKDETTIVGGAGSAQAIKGRIEQIRAEIEASTSDYD
REKLQERLAKLAGGVAIIRVGAATETELKEKKHRVEDALSATRAAVEEGIVPGGGVALIN
AIPALDKLNLEGDAATGVKILRRALEEPMRMIAANAGLDGAVVIEKVRMLHEQGQMTTGY
DVLRNDYVDMLKAGIIDPVKVTRSAVENACSIAAMILTTSALVCDIPEEKAATPAGGGMG
MDM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacaaatcatttacgaagacgaagcacgacgtgcgttaaaagcgggcgttgac
gcgctggcaaacgctgtcaagaccaccctgggtccgaagggccgcaatgtcgctctggac
aagaaatggggcagcccgaccgtcacccacgacggcgtcaccgtagccaaggagatcgag
ctgaaagatcccttcgagaacatgggtgcccagttgctcaaggaggcagcaaccaagacc
aatgacgtggctggtgacggcaccaccactgccaccgtgctggctcaggccatcgtcaat
gaaggtctgaaaaacgtcaccgctggcgccaatccgatgctgctcaagcgcggcattgag
gccggccgcgatgccgttgtggcggcgctgaaagagatggccaccccggtcgccggcaag
gaagagatcgcccaggtggcgagcatttccgctgcagaccagaccatcggcaacctgatc
gccgaggtgatggagaaggttggcaaggacggcgtcatcaccgtcgaagagagcaagggc
cttcagttcgagaccgagtacgtcgaaggcatgcagatcgaccgcggttacctgagcccc
tacttcgtcaccaatgcggagcgcatggaagcggtcgttgaggatccctacatcctgatc
accgacaagaagatcagcagtgcgcaggacatcgtcccgacgctggagaagctggtccag
atcggcaagcgcgacatcgtcgtcatcgccgaggatgtggacggtgaagcgttggctacc
ctcgtgctgaacaagctgcgcggcatggtcaacgccctggctgttaaggcgcctggtttc
ggcgatcgccgcaaagccatgttgcaggacatcgccattttgaccggcggtcaggtgatc
acggaggagttgggtcgcaagctggacagcgtcaagctggaagatctgggtcgcgccagc
cgcgttgtcagcaccaaggacgagacgaccatcgtcggtggcgccggctctgcgcaggcg
attaagggccgcatcgagcagatccgcgccgagatcgaagccagcaccagcgactacgac
cgcgagaagctgcaggagcgcctggccaagctggccggcggcgtggcgatcatccgcgtg
ggcgctgccaccgagaccgagttgaaagagaagaaacatcgcgttgaggacgctctgagc
gctacccgcgccgcggttgaggaaggcatcgtgcctggcggcggcgtcgccctgatcaac
gccatcccggcgctggataaattgaacctggaaggcgatgctgcgaccggcgtcaagatt
ctgcgccgcgcgctcgaggagccgatgcgcatgatcgccgccaatgcgggtctggatggc
gctgtggtgatcgagaaagtgcgcatgctgcacgaacagggtcagatgaccaccggttac
gacgtgctcagaaacgactacgtcgacatgctgaaggctggcatcattgacccggtcaag
gtcacacgcagcgcagtcgagaatgcctgctccatcgccgccatgatcctgaccacctct
gcactggtctgcgatattccggaagagaaggcggcaacacctgctggcggcggcatgggc
atggacatgtaa
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