Caldilinea aerophila: CLDAP_06620
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Entry
CLDAP_06620 CDS
T01797
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cap
Caldilinea aerophila
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cap03016
]
CLDAP_06620 (rnz)
Enzymes [BR:
cap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CLDAP_06620 (rnz)
Transfer RNA biogenesis [BR:
cap03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CLDAP_06620 (rnz)
Prokaryotic type
CLDAP_06620 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
BAL98701
UniProt:
I0I0B4
LinkDB
All DBs
Position
complement(826151..827050)
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AA seq
299 aa
AA seq
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MQRGLSSALVMANEHRFMIDCGEGTQRQLLRTGLGFRRLDKILLTHGHLDHILGLGGLAS
TLGRWEALEELNIYGGAMTLARVQMLMEVVFGPGQIAGSGVTLNLLEPGVLFEDKHFTLT
AVPVQHRGPDCFAFLFEEKSRRPFLAEKAEALGIPQGPVRRELAQGRPATLPDGRVIQPD
EVLGPPQRGAKLFFVGDVSHTGALHAYAEKADLLVIEATYLEVDKQLARQHGHITAASAA
KLARNAGVRQLVLHHVSRRYTTQQILDEAQAIFPDTLVANDLDCFSVHKDKPITLRSLR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgcgggctgtcatcagcgctggtgatggcaaacgagcatcgtttcatgatcgat
tgtggcgagggcacgcaacggcagcttctgcgtaccgggctgggctttcggcgcctggat
aaaattttgcttacgcatgggcacctggatcatattctagggttgggcgggctggcttcc
accctggggcgttgggaggcgctggaagagctaaacatctacggcggcgcgatgacgctg
gcgcgtgtgcagatgttgatggaggttgtcttcgggccgggacagatcgccggttcgggc
gtgacgctcaacctgttggagcctggggtattgtttgaagataaacacttcaccttgacg
gctgtacccgtgcaacatcgtggcccggactgttttgcgtttctgttcgaggagaaatcg
cgccgcccctttctggcggagaaggcggaggcgcttggtattccacaggggccagtgcgg
cgcgaactggcgcaggggcgccctgcaacgttgccggacggtcgcgtcattcagccagac
gaggtgctgggtccgccgcagcgaggggccaaactcttctttgtgggcgatgtcagccac
accggtgcgttgcatgcatacgccgaaaaagccgatctgcttgtcatcgaggcaacgtat
ttagaggtcgataaacaactcgccaggcagcatggccacatcacagccgccagcgctgcc
aaactggcacgcaatgcaggggtgcgtcagcttgtgctccaccatgttagcaggcgctat
acgacccagcaaatcctggatgaagcgcaggccattttccccgatacgctggttgccaac
gacctggactgcttcagcgtgcacaaagataaaccgatcacattgcgcagtctgcgctga
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