Caldilinea aerophila: CLDAP_09880
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Entry
CLDAP_09880 CDS
T01797
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cap
Caldilinea aerophila
Pathway
cap03410
Base excision repair
cap03430
Mismatch repair
cap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLDAP_09880 (recJ)
03430 Mismatch repair
CLDAP_09880 (recJ)
03440 Homologous recombination
CLDAP_09880 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cap03400
]
CLDAP_09880 (recJ)
DNA repair and recombination proteins [BR:
cap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CLDAP_09880 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CLDAP_09880 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CLDAP_09880 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
RecJ_C_Deinoc
Motif
Other DBs
NCBI-ProteinID:
BAL99027
UniProt:
I0I190
LinkDB
All DBs
Position
1231159..1233564
Genome browser
AA seq
801 aa
AA seq
DB search
MITPLPWILKPPITPSPELIAAVGGHPLVAQLLAQRGIDTPEKAIPFLDPKQYRPAPPSA
LLGVEEAATLLHEAIRSRRNILVWGDFDVDGQTSTALLVTALRMLGDDEQVRFHVPNRFE
EGHGIRLAKLQEKLSEYPADVLLTCDTGIAEGAAIGYARERGMTVIVTDHHDLSAEFHGL
QPGVDPLWGLSADAAGIESVRRASAIVNPKFLPEGDPLRTLPGVGVAYKLVQRLFELAGR
GGEEEEMLDLVALGIVADVAEQVNDARYLLQRGLEKLRNTRRVGLMALMEISRVDPSRPP
AESIGFQLGPRMNALGRLDDATVSVELLSTRDPLRARQLASKLERLNQERRVLTSQITRS
AEEMIERNPSLLDFNALVLAHPQWHAGVVGIVASRLVERYGKPAVLLLTPPGEVARGSAR
SAPGVDIGAAIAACSHLLVAHGGHPGAAGLSLLPENIDAFRRELSRQVELHRDPAVQPGL
QIDAEVRLSELSLELERDVARLAPFGQGNPQPRFVTFGVHVVSDRRMGVDGSHRKLQIRP
AGVEGPVHELLWFGGGDAELSTGALDVVYTLGVNDYRGERSLQLMYVAHRPAQPRVVEVM
PEKAQRVQVVDLRRSPDPLPQLPAEAAWYAEGALLETSSPGVAYAPRFETPAQPGRPLVL
WSTPPSGELLHWLIESSGCETVYLCARATTDDAPAAVIRDVARMAKYAVNRDHLIDIGRM
AARLGQTEAVIRTALLLLEGRGIVRLAEWLDGDCARIEAGDAQAQTADLDAIKAEFEALL
AEVRAYRRFVARARVEDLGIR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgattacgcccctgccctggatcctcaaaccgccgatcacgccttcgcctgagctgatc
gccgctgtcggcggacatccgctggtggcacagttgctggcacaacgcgggatcgacacg
ccggagaaggccatcccgttcctcgatccaaaacaatacaggccggcgccgccctctgct
ctgctcggcgtggaagaggcggcaacgctgctgcatgaggcgatccgtagccggcgcaac
attctggtttggggcgattttgatgtcgatggacagacgagcacagcgctgctggtcacg
gcattgcgcatgctgggggacgacgagcaggtgcgttttcacgttccgaatcgctttgag
gagggacacggtattcggctggccaagctccaggaaaaattgtccgagtatcccgccgat
gtgttgctaacctgcgacaccggcatcgccgaaggggctgcgatcggctatgcgcgcgag
cgcggaatgacggtgatcgtcaccgatcaccatgacctttccgcagagttccacgggctg
cagccaggcgtcgatccgctgtgggggctgagcgccgacgcagcgggcatcgagagtgtg
cgccgcgccagtgcgatcgtgaatcccaaatttttgccggaaggcgacccgctgcgcacg
ctgcccggcgtgggcgtggcctataaactggtgcagcggctgttcgagcttgccggtcgc
gggggcgaggaggaagagatgctcgacctggtggcgttgggtatcgtcgccgacgtcgcc
gaacaggtcaacgatgctcgctacctcttgcaacgcggcctggagaagttgcgcaacact
cgtcgcgtcggcctgatggccttgatggagatttcgcgcgtcgatccttccaggccgccc
gccgagtcgatcggctttcagcttggcccacgtatgaatgcgttggggcgccttgacgac
gctacggtctccgttgagctgctctcgacgcgcgacccgttgcgggcgcgtcagctcgcc
agcaaactggagcgactcaaccaggaacgtcgcgtgctcaccagtcaaatcacccgctcg
gctgaggagatgatcgagcgcaaccccagcctgctggacttcaacgcgctggtgctggcg
cacccgcagtggcacgccggcgtggttggcatcgtcgcatcccggctggtggaacgctac
ggcaagccggcggtgttgttgctcacgccgcccggcgaagtggcacgcggcagcgcgcgc
agtgcgccgggcgtggacatcggcgccgccatcgctgcctgcagccatctgttagtcgcc
cacggcggccatccaggtgcggcgggcctgagcctgctgccggagaacatcgacgctttc
cgccgcgagctgagccgccaggtagaattgcaccgggaccctgcggtgcagccgggccta
cagatcgatgccgaagtgcgcttgagcgaactttcgttggagcttgagcgagatgtggcg
cggttggcgccttttgggcagggcaacccgcagccccgcttcgtcaccttcggcgttcac
gttgtttccgatcgccgcatgggcgttgatggcagccatcgcaagctgcagattcgcccc
gccggcgtcgaggggccggtgcatgaattgctctggtttggcggcggtgacgctgaactt
tctaccggcgcgctggacgtcgtctacacccttggcgtcaacgattaccgcggcgagcgc
tccttgcagttgatgtatgtggcacatcgtccggcgcagccgcgcgtcgtcgaggtgatg
ccagagaaagcgcaacgcgtgcaggtggtggacctgcggcgcagccccgatccgttgcct
caattgcccgcagaggcggcttggtatgcggaaggcgccttgttggagacgagcagccct
ggcgtcgcctacgcgcctcgtttcgagacgcctgcacaacctggccgtcctctggttttg
tggagcactccaccctctggagagttgttacactggctgatcgagagcagcggctgtgag
acggtgtatctctgcgcacgtgctacgacagatgacgcccccgccgccgtgattcgagat
gtggcgcgcatggccaaatatgcagtgaatcgcgaccatctcattgacatcgggcggatg
gccgctcgcctgggtcaaacggaagcggtgatccgcacagcgctgttgctgctggaaggt
agaggcatcgtgcggttagccgagtggctggacggtgactgcgcccgtattgaagccggt
gacgcccaggcgcagacggccgatctcgacgcgatcaaggcagagtttgaggcgttgctt
gccgaggtgcgtgcatatcggcgcttcgtggcacgtgcacgcgtggaagatttgggaatc
aggtaa
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integrated database retrieval system
