Caldilinea aerophila: CLDAP_10000
Help
Entry
CLDAP_10000 CDS
T01797
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cap
Caldilinea aerophila
Brite
KEGG Orthology (KO) [BR:
cap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cap03016
]
CLDAP_10000 (rnd)
Enzymes [BR:
cap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CLDAP_10000 (rnd)
Transfer RNA biogenesis [BR:
cap03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CLDAP_10000 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
DNA_pol_A_exo1
TPR_2
Motif
Other DBs
NCBI-ProteinID:
BAL99039
UniProt:
I0I1A2
LinkDB
All DBs
Position
complement(1244102..1245289)
Genome browser
AA seq
395 aa
AA seq
DB search
MADDSKPVQSLIYTTSSLRRLVDYLRGQPRFALDTESNSLYSYQGKVCLIQISTYATGKE
EILDFLVDPLRLKDLSPLGELLVDPAIEVVMHAADNDILMLYRSYGFRFGRVFDTQLAAR
ILGWKQVGLAAILEKHFGIVSNKRMQRTDWGKRPLTPEQIAYAQMDTHYLLPLRDRLAEE
LRRKGRWEEALDAFATLTSSDPATRMPDERTFWQMRAVRTVPQECLGVLEALWRWREQKA
QSLDRPPFKVVNDATLIELAKTQPLTLDALKETPGLSPLQVRRFGEELLQVIHAGRQRPT
PTPPDDEGRPEPMLDEAVQARYNALRRWRTEVAQQRGVDADIVLPNSALLAIATLNPATL
DALAALPELTAWKLATYGPQLLAILAETDAPQPAS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgattcaaaaccggttcaatcactcatctatacgacaagctcactgcgtcgt
ctggtcgattatctgcgcggccagccccgctttgcgctcgacacagaaagcaacagctta
tacagctatcagggcaaggtctgcctgatccagatttccacctatgcgacgggcaaggaa
gagattcttgactttttggtggatcccttacggctgaaggatctttctccattgggtgaa
ctgcttgtcgaccctgcgattgaagtcgtgatgcacgcagccgacaacgacattctgatg
ttgtatcgcagctatggtttcaggtttggccgcgtcttcgacacgcaactggcggcgcgt
atcctgggctggaagcaggttgggttagcggcgattctggaaaaacatttcggcatcgtc
agcaataagcgcatgcagcgcacagactggggaaaacgtccactgacgccggaacagatc
gcttatgcgcagatggacacccactatctgttacccttgcgcgatcgactggcggaggag
cttcgacgtaaaggacgttgggaggaggcactggacgcctttgcaacgttgacgagcagt
gacccggctacacgcatgcccgatgagcgcacgttctggcaaatgcgcgcagtgcgcaca
gtgcctcaagaatgcctgggcgtactcgaggcactgtggcgctggcgcgaacagaaggcg
cagtcactcgatcgccctcccttcaaggtcgtcaatgacgctacgctgatcgaactggcc
aaaactcaacctcttacccttgatgcactgaaggagacgccggggctgtcccctttgcag
gtcaggcgatttggcgaggaacttcttcaggtcatccatgctggtcgacagcggccaacg
ccgacgcctcctgacgatgaaggacggcctgaacccatgcttgacgaggctgtgcaggca
cgctataacgccctgcgtcgctggcgcaccgaagtggcgcaacagcgcggcgtcgacgcc
gacatcgtgcttcccaacagcgcgctgttggccatcgcaaccctcaaccccgctaccctg
gatgcattggcggcgcttccagagctgaccgcctggaagctggccacctacggtccccag
cttctcgccatcctcgcagagaccgacgcgcctcaacccgcttcttag
DBGET
integrated database retrieval system
